RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	PEX12	O00623	359 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ADRB1	P08588	477 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	HTR2B	P41595	481 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	MAN2A2	P49641	1150 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	KHK	P50053	298 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	GNA13	Q14344	377 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	CRTC2	Q53ET0	693 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	TRMT12	Q53H54	448 aa	Known RBP	13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	FHL5	Q5TD97	284 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	FAAH2	Q6GMR7	532 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ACSM5	Q6NUN0	579 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	LANCL3	Q6ZV70	420 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ZER1	Q7Z7L7	766 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	RBM45	Q8IUH3	476 aa	Known RBP	13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ZNF485	Q8NCK3	441 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ZNF248	Q8NDW4	579 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	SLC2A12	Q8TD20	617 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	C1GALT1C1	Q96EU7	318 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	RNFT2	Q96EX2	444 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	SENP5	Q96HI0	755 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	KCNJ15	Q99712	375 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ATF6B	Q99941	703 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ARHGAP9	Q9BRR9	750 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ACTRT3	Q9BYD9	372 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ZNF700	Q9H0M5	742 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ING3	Q9NXR8	418 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ADAM30	Q9UKF2	790 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	HS3ST3B1	Q9Y662	390 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	LYRM1	O43325	122 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	ORC5	O43913	435 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	IGKV3-11	P04433	115 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	HMGN2	P05204	90 aa	Known RBP	13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	APEX1	P27695	318 aa	Known RBP	13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	EVX1	P49640	407 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	EFNA3	P52797	238 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	PRKAG1	P54619	331 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	DCAF7	P61962	342 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	RPS26	P62854	115 aa	Known RBP	13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	FABP5	Q01469	135 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	ACSM1	Q08AH1	577 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	CCNJ	Q5T5M9	372 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	SIGIRR	Q6IA17	410 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	MZT2A	Q6P582	158 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	FAM111B	Q6SJ93	734 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	TRIL	Q7L0X0	811 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	NDUFAF7	Q7L592	441 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	SLC29A4	Q7RTT9	530 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	PRICKLE2	Q7Z3G6	844 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	CADM2	Q8N3J6	435 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540		Q8N402	240 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	FAM109A	Q8N4B1	249 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	SYT14	Q8NB59	555 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR4K5	Q8NGD3	323 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR52R1	Q8NGF1	315 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR8K3	Q8NH51	312 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	STAC	Q99469	402 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	FNDC11	Q9BVV2	318 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	BEX2	Q9BXY8	128 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	DPH1	Q9BZG8	443 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR8D2	Q9GZM6	311 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR10A5	Q9H207	317 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	MAN2C1	Q9NTJ4	1040 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	P2RX2	Q9UBL9	471 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	SEC14L3	Q9UDX4	400 aa		13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	YARS2	Q9Y2Z4	477 aa	Known RBP	13.36	□□□□□ -0.27
NR1H3-231	ENST00000529540	IGHV1-45	A0A0A0MS14	117 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	NSG1	A0A0A6YYJ2	146 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	SLC19A2	O60779	497 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	DDAH2	O95865	285 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	CBX7	O95931	251 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	AK1	P00568	194 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	CT62	P0C5K7	136 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	S1PR1	P21453	382 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	GAL	P22466	123 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	HOXD11	P31277	338 aa	Predicted RBP	13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	RRAS2	P62070	204 aa	Predicted RBP	13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	BTG1	P62324	171 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	FOXD4	Q12950	439 aa	Predicted RBP	13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	MAB21L1	Q13394	359 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	LASP1	Q14847	261 aa	Known RBP	13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	TMEM44	Q2T9K0	475 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	MFSD12	Q6NUT3	480 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	CDC73	Q6P1J9	531 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	ARIH2OS	Q8N7S6	290 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	C17orf47	Q8NEP4	570 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	SNIP1	Q8TAD8	396 aa	Known RBP	13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	BBS10	Q8TAM1	723 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	ZNF721	Q8TF20	911 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	DEDD2	Q8WXF8	326 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	NR4A3	Q92570	626 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	TMEM203	Q969S6	136 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	PRRC1	Q96M27	445 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	SEMA4C	Q9C0C4	833 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	DUSP22	Q9NRW4	184 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	WDR70	Q9NW82	654 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	ASB6	Q9NWX5	421 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	MRPL39	Q9NYK5	338 aa	Known RBP	13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	POLH	Q9Y253	713 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	CARD8	Q9Y2G2	431 aa		13.35	□□□□□ -0.27
NR1H3-231	ENST00000529540	CFAP54	Q96N23	3096 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms