RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SELENOWP63302 87 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 BNIP2Q12982 314 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 C1DQ13901 141 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 CEACAM7Q14002 265 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 PDK3Q15120 406 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 CDSNQ15517 529 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR1Q1Q15612 314 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 DUSP7Q16829 419 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 GLIPR1L2Q4G1C9 344 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 IFI44LQ53G44 452 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ENTPD8Q5MY95 495 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 OTUD3Q5T2D3 398 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 FAM69AQ5T7M9 428 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF787Q6DD87 383 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM225Q6GV28 225 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ABLIM2Q6H8Q1 611 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 C8orf82Q6P1X6 216 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 VWA1Q6PCB0 445 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 TTC33Q6PID6 262 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 PAQR6Q6TCH4 344 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 DEF8Q6ZN54 512 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 HIST3H2AQ7L7L0 130 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ABHD12BQ7Z5M8 362 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 BTLAQ7Z6A9 289 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 GALNT5Q7Z7M9 940 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 GPAT4Q86UL3 456 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 DEFB107AQ8IZN7 70 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ARHGAP24Q8N264 748 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 UBE2J2Q8N2K1 259 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 GPR32P1Q8NGA4 272 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR6T1Q8NGN1 323 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 MFSD8Q8NHS3 518 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ADAMTS16Q8TE57 1224 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 FAM222BQ8WU58 562 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 GEMIN6Q8WXD5 167 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 HIST1H2ACQ93077 130 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 MCUR1Q96AQ8 359 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 APH1AQ96BI3 265 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC25A36Q96CQ1 311 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 STARD4Q96DR4 205 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 DNAJA3Q96EY1 480 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 NSL1Q96IY1 281 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 MPP4Q96JB8 637 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ARL5BQ96KC2 179 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM43Q9BTV4 400 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 KLHL4Q9C0H6 718 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ENKD1Q9H0I2 346 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 OPN3Q9H1Y3 402 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 C12orf49Q9H741 205 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 BCO1Q9HAY6 547 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 NPDC1Q9NQX5 325 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 PARPBPQ9NWS1 579 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 GALNT8Q9NY28 637 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 ABCD2Q9UBJ2 740 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 KCNN3Q9UGI6 736 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC7A7Q9UM01 511 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 SAMD4AQ9UPU9 718 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 RASD1Q9Y272 281 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 NOSIPQ9Y314 301 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 FAM32AQ9Y421 112 aaKnown RBP4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 CHST2Q9Y4C5 530 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 CORINQ9Y5Q5 1042 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 SVILO95425 2214 aa4.82□□□□□ -1.64
HMGB1P40-201ENST00000525121 NINQ8N4C6 2090 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 IGKV3D-15A0A087WSY6 115 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 A0A087WUJ7 227 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZC3H12DA2A288 527 aaKnown RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 AQP7P3A6NL99 342 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 B2RBV5 119 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 C16orf97H3BN30 126 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 C19orf84I3L1E1 186 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 MRPL33O75394 65 aaKnown RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 GCM2O75603 506 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 AKR7A3O95154 331 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR5F1O95221 314 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR6A2O95222 327 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 GOSR1O95249 250 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 MT-ATP6P00846 226 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 SERPINA1P01009 418 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 THRBP10828 461 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 UMPSP11172 480 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 IMPDH2P12268 514 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 HSD17B1P14061 328 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 PPP3CBP16298 524 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 ITGA2P17301 1181 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 GGT1P19440 569 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 TCN1P20061 433 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 IL32P24001 234 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 HOXC12P31275 282 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 RBM34P42696 430 aaKnown RBP4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 PCYT1AP49585 367 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC16A1P53985 500 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 CDH12P55289 794 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC25A3Q00325 362 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 TFF3Q07654 80 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 ST3GAL3Q11203 375 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 P2RY6Q15077 328 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 GUSBP1Q15486 140 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 TAF11Q15544 211 aa4.81□□□□□ -1.64
HMGB1P40-201ENST00000525121 NPTX1Q15818 432 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms