RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 APH1AQ96BI3 265 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 Q96MF0 132 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 SPATA9Q9BWV2 254 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 BCL2L10Q9HD36 194 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 A4GALTQ9NPC4 353 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 NGBQ9NPG2 151 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 NPAP1Q9NZP6 1156 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 CCDC167Q9P0B6 97 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 MALT1Q9UDY8 824 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 ZNF232Q9UNY5 417 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 FLVCR1Q9Y5Y0 555 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 GMEB1Q9Y692 573 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 CR1P17927 2039 aa10.91□□□□□ -0.66
VEGFA-223ENST00000523125 NAV3Q8IVL0 2385 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 TRBV5-3A0A0A0MS03 114 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 LIPT2A6NK58 231 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 OR5H1A6NKK0 313 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 OVOL3O00110 214 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 PDLIM1O00151 329 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 CLOCKO15516 846 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 EIF1BO60739 113 aaKnown RBP10.9□□□□□ -0.66
VEGFA-223ENST00000523125 MRPL33O75394 65 aaKnown RBP10.9□□□□□ -0.66
VEGFA-223ENST00000523125 SOD3P08294 240 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 ITGA5P08648 1049 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 DANCRP0C864 163 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 CXCR1P25024 350 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 AQP5P55064 265 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 STX1BP61266 288 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 FADDQ13158 208 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 CEACAM7Q14002 265 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 STK11Q15831 433 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 ZSWIM7Q19AV6 140 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 PRAMEF8Q5VWM4 474 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 PRAMEF7Q5VXH5 474 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 WBP2NLQ6ICG8 309 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 P2RY8Q86VZ1 359 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 UBE2J2Q8N2K1 259 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 CADM2Q8N3J6 435 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 GOLGA6L1Q8N7Z2 621 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 TMEM99Q8N816 258 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 KBTBD8Q8NFY9 601 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 TMEM171Q8WVE6 324 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 SPDL1Q96EA4 605 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 COX4I2Q96KJ9 171 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 TRIM2Q9C040 744 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 IKZF5Q9H5V7 419 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 ASB6Q9NWX5 421 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 VAPAQ9P0L0 249 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 IFT52Q9Y366 437 aa10.9□□□□□ -0.66
VEGFA-223ENST00000523125 TRIM64A6NGJ6 449 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 TRIM64BA6NI03 449 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 TMEM229AB2RXF0 380 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 SHISA9B4DS77 424 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 H7C1Q1 480 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 NR5A2O00482 541 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 FRS3O43559 492 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 TMCC2O75069 709 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 NPIPB7O75200 414 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 RAD51DO75771 328 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 AKR7A3O95154 331 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 GPIP06744 558 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 ARAFP10398 606 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 IDUAP35475 653 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 P2RY4P51582 365 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 HOXC5Q00444 222 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 FAPQ12884 760 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 OR7A5Q15622 319 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 GABRA6Q16445 453 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 PGGHGQ32M88 737 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 KRTAP21-3Q3LHN1 58 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 ZNF672Q499Z4 452 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-223ENST00000523125 ZNF311Q5JNZ3 666 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 OTUD3Q5T2D3 398 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-223ENST00000523125 Q71RC1 249 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-223ENST00000523125 COMTD1Q86VU5 262 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 OR52E4Q8NGH9 312 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 FBXW5Q969U6 566 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 C3orf49Q96BT1 292 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 MUCL1Q96DR8 90 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 MUS81Q96NY9 551 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 NAA11Q9BSU3 229 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-223ENST00000523125 RAD21L1Q9H4I0 556 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 SLC7A10Q9NS82 523 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 TMEM45AQ9NWC5 275 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 LAMP3Q9UQV4 416 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 SLC9A8Q9Y2E8 581 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 SLC25A15Q9Y619 301 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 TLN2Q9Y4G6 2542 aa10.89□□□□□ -0.67
VEGFA-223ENST00000523125 TMEM247A6NEH6 219 aa10.88□□□□□ -0.67
VEGFA-223ENST00000523125 AQP7P3A6NL99 342 aa10.88□□□□□ -0.67
VEGFA-223ENST00000523125 A8MVM7 634 aa10.88□□□□□ -0.67
VEGFA-223ENST00000523125 HMGB1P1B2RPK0 211 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-223ENST00000523125 LY6G6DO95868 133 aa10.88□□□□□ -0.67
VEGFA-223ENST00000523125 ETS2P15036 469 aa10.88□□□□□ -0.67
VEGFA-223ENST00000523125 H2AFXP16104 143 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-223ENST00000523125 GPX2P18283 190 aa10.88□□□□□ -0.67
VEGFA-223ENST00000523125 ATP4BP51164 291 aa10.88□□□□□ -0.67
VEGFA-223ENST00000523125 COPZ1P61923 177 aa10.88□□□□□ -0.67
VEGFA-223ENST00000523125 EGR4Q05215 589 aa10.88□□□□□ -0.67
VEGFA-223ENST00000523125 AGKQ53H12 422 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms