RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SENP1Q9P0U3 644 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 MYEF2Q9P2K5 600 aaKnown RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 TESQ9UGI8 421 aaKnown RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 ZNF225Q9UK10 706 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 OR6C65A6NJZ3 312 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 H3BS24 57 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 SULT2B1O00204 365 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 DNALI1O14645 258 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 RGS13O14921 159 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 SYNGR3O43761 229 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 DNAJA2O60884 412 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 CLPXO76031 633 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 NDUFA7O95182 113 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 GPANK1O95872 356 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 TIA1P31483 386 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 P2RX1P51575 399 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 PROK1P58294 105 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 LCN2P80188 198 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 TGFBR3Q03167 851 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 MAD2L1BPQ15013 274 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 QPRTQ15274 297 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 DUSP5Q16690 384 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 C3orf36Q3SXR2 165 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 TIGD2Q4W5G0 525 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 ATP6AP1LQ52LC2 224 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 ZNF362Q5T0B9 420 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 CCDC137Q6PK04 289 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 CASP12Q6UXS9 341 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 RPS27LQ71UM5 84 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 LINGO2Q7L985 606 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 OR1K1Q8NGR3 316 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 OR4F5Q8NH21 305 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 PHOSPHO1Q8TCT1 267 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 TSPAN17Q96FV3 270 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 OTUB1Q96FW1 271 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 MS4A14Q96JA4 679 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 GPR78Q96P69 363 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 BBS4Q96RK4 519 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 KCNS3Q9BQ31 491 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 C3orf14Q9HBI5 128 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 NMRAL1Q9HBL8 299 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 HHATLQ9HCP6 504 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 OBP2BQ9NPH6 170 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 EQTNQ9NQ60 294 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 DDX18Q9NVP1 670 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 GPATCH2Q9NW75 528 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 UPB1Q9UBR1 384 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 KLHL21Q9UJP4 597 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 GUCA1BQ9UMX6 200 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 FLVCR1Q9Y5Y0 555 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 DOCK11Q5JSL3 2073 aa7.53□□□□□ -1.2
TRAPPC9-212ENST00000521944 ARPC4-TTLL3A0A0A6YYG9 625 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 TRAPPC2LH3BP13 241 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 M0R233 179 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 SCDO00767 359 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 GPR171O14626 319 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 CDC14BO60729 498 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 SEC14L2O76054 403 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 NUDT14O95848 222 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 LGI1O95970 557 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 IGHV4-38-2P0DP08 117 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 NAT2P11245 290 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 MAGEB1P43366 347 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 EVX1P49640 407 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 SUMO3P55854 103 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 IFT88Q13099 833 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 GGTA1PQ4G0N0 100 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 TTC19Q6DKK2 380 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 ZNF551Q7Z340 670 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 FAM169BQ8N8A8 192 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 OR4F6Q8NGB9 312 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 LINC01006Q8NI28 216 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 RHEBL1Q8TAI7 183 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 GTF3AQ92664 365 aaKnown RBP7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 POP5Q969H6 163 aaKnown RBP7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 C16orf58Q96GQ5 468 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 APIPQ96GX9 242 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 EAF1Q96JC9 268 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 WWC2-AS2Q96NR7 200 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 RBBP8Q99708 897 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 MS4A5Q9H3V2 200 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 BRF2Q9HAW0 419 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 NOX3Q9HBY0 568 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 AURKAIP1Q9NWT8 199 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 TAS2R7Q9NYW3 318 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 VPS29Q9UBQ0 182 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 LEF1Q9UJU2 399 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 CACNG2Q9Y698 323 aa7.52□□□□□ -1.21
TRAPPC9-212ENST00000521944 PPIAL4EA0A075B759 164 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 PPIAL4CA0A0B4J2A2 164 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 C5orf63A6NC05 138 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 PPIAL4DF5H284 164 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 NPIPB9F8W1W9 429 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 GOLGA6L22H0YM25 854 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 CCDC188H7C350 402 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 PIP5K1BO14986 540 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 HOXA3O43365 443 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 PCDH7O60245 1069 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 OPN1MWP04001 364 aa7.51□□□□□ -1.21
TRAPPC9-212ENST00000521944 PPIAL4FP0DN26 164 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms