RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 RNASEK-C17orf49H0YIS7 233 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 SPOPO43791 374 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF500O60304 480 aaPredicted RBP5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 MRPL33O75394 65 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 OPN1SWP03999 348 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 TMEM253P0C7T8 217 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 UROSP10746 265 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 PCNAP12004 261 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 ELK4P28324 431 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 RGS4P49798 205 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 FGF12P61328 243 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 SLC35A2P78381 396 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 DCTN2Q13561 401 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 FXNQ16595 210 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 TMEM255AQ5JRV8 349 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 KLHL24Q6TFL4 600 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 CASP12Q6UXS9 341 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 COMTD1Q86VU5 262 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 GAS2L3Q86XJ1 694 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 GALNT4Q8N4A0 578 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 FAM169BQ8N8A8 192 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 ZIC4Q8N9L1 334 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 CEP70Q8NHQ1 597 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 HUS1BQ8NHY5 278 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 ABHD4Q8TB40 342 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 SLC35B2Q8TB61 432 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 CCL17Q92583 94 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 PTCD3Q96EY7 689 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 CMTM7Q96FZ5 175 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 Q96M66 194 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 OSBPL8Q9BZF1 889 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 TBL1XR1Q9BZK7 514 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 PPA2Q9H2U2 334 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 OBP2BQ9NPH6 170 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 LCMT1Q9UIC8 334 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 PCDHA9Q9Y5H5 950 aa5.56□□□□□ -1.52
CTNNA1-216ENST00000519489 SRRM2Q9UQ35 2752 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 ZCWPW2A0A1B0GU75 182 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 TCRBV7S3A2A0A539 114 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 VSTM5A8MXK1 200 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 ALG1L2C9J202 215 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 SKAP2O75563 359 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 SERPING1P05155 500 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 APRTP07741 180 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 TPM2P07951 284 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 ENO2P09104 434 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 SBK2P0C263 348 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF35P13682 527 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 CBR1P16152 277 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 SLC6A2P23975 617 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 TGFBR2P37173 567 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 SLC1A1P43005 524 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 KIR2DS4P43632 304 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 VEGFCP49767 419 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 DIO1P49895 249 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF41P51814 821 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 RAP1GDS1P52306 607 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 SLC16A1P53985 500 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 CHIT1Q13231 466 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 DDX39BQ13838 428 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 HABP2Q14520 560 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 C1QTNF12Q5T7M4 302 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 LRRC8EQ6NSJ5 796 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 SLC48A1Q6P1K1 146 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 PAQR6Q6TCH4 344 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 CBLN3Q6UW01 205 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 LCNL1Q6ZST4 164 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 OR9A2Q8NGT5 310 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 CCDC126Q96EE4 140 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 NEURL3Q96EH8 262 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF75AQ96N20 296 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 OR5B2Q96R09 309 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 DIRC2Q96SL1 478 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 MTERF1Q99551 399 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 IL22Q9GZX6 179 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 QRSL1Q9H0R6 528 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 CCDC68Q9H2F9 335 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 CRLF2Q9HC73 371 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 HINT3Q9NQE9 182 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 SERTAD4Q9NUC0 356 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 EXD2Q9NVH0 621 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 TAAR3PQ9P1P4 343 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 DUSP13Q9UII6 198 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 VPREB3Q9UKI3 123 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 OR10H1Q9Y4A9 318 aa5.55□□□□□ -1.52
CTNNA1-216ENST00000519489 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 KIR2DS1A0A191URI9 304 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 A0A1B0GVY2 172 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 NCF1BA6NI72 391 aaPredicted RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 NCF1CA8MVU1 366 aaPredicted RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 MYO1GB0I1T2 1018 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 PFDN6O15212 129 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 DEDDO75618 318 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 OXSR1O95747 527 aaPredicted RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 LY6G6CO95867 125 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 ZSCAN5DPP0CG00 497 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 BCKDHAP12694 445 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 NCF1P14598 390 aaPredicted RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 MMP9P14780 707 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 PRKCAP17252 672 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms