RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 KLHL9Q9P2J3 617 aa20.2■□□□□ 0.82
SKP1-206ENST00000519321 EMC9Q9Y3B6 208 aa20.2■□□□□ 0.82
SKP1-206ENST00000519321 SNX13Q9Y5W8 968 aa20.2■□□□□ 0.82
SKP1-206ENST00000519321 PRSS44E7EML9 344 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 OR2T1O43869 369 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 SS18L1O75177 396 aaPredicted RBP20.19■□□□□ 0.82
SKP1-206ENST00000519321 NPIPB7O75200 414 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 IFNW1P05000 195 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 OR1E2P47887 323 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 CDH12P55289 794 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 CTBP2P56545 445 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 CEACAM7Q14002 265 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 CDSNQ15517 529 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 DNAL1Q4LDG9 190 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 DEF8Q6ZN54 512 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 MED12LQ86YW9 2145 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 CNEP1R1Q8N9A8 125 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 MPP4Q96JB8 637 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 NSMCE2Q96MF7 247 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 UCK2Q9BZX2 261 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 MUC13Q9H3R2 512 aa20.19■□□□□ 0.82
SKP1-206ENST00000519321 DCAF13Q9NV06 445 aaKnown RBP20.19■□□□□ 0.82
SKP1-206ENST00000519321 PLEKHB1Q9UF11 243 aaPredicted RBP20.19■□□□□ 0.82
SKP1-206ENST00000519321 BAHCC1Q9P281 2608 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 SMAD9O15198 467 aaKnown RBP20.18■□□□□ 0.82
SKP1-206ENST00000519321 CYTIPO60759 359 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 TNFSF13O75888 250 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 THRBP10828 461 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 IMPDH2P12268 514 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 TNFRSF1BP20333 461 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 ASCL1P50553 236 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 TAS2R41P59536 307 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 PDK3Q15120 406 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 GUSBP1Q15486 140 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 RELL2Q8NC24 303 aaPredicted RBP20.18■□□□□ 0.82
SKP1-206ENST00000519321 OR6K3Q8NGY3 331 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 MFSD8Q8NHS3 518 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 PIGXQ8TBF5 258 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 HSH2DQ96JZ2 352 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 TMEM43Q9BTV4 400 aa20.18■□□□□ 0.82
SKP1-206ENST00000519321 DOPEY2Q9Y3R5 2298 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 LIPT2A6NK58 231 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 GYG2O15488 501 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 ATP5HO75947 161 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 OR5F1O95221 314 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 FPR1P21462 350 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 KIR2DL2P43627 348 aaPredicted RBP20.17■□□□□ 0.82
SKP1-206ENST00000519321 RASSF2P50749 326 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 EGR4Q05215 589 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 RASGEF1BQ0VAM2 473 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 OR7A5Q15622 319 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 TMEM201Q5SNT2 666 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 PAQR6Q6TCH4 344 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 VTCN1Q7Z7D3 282 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 OR6S1Q8NH40 331 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 ABHD3Q8WU67 409 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 SLC41A3Q96GZ6 507 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 KLHL13Q9P2N7 655 aa20.17■□□□□ 0.82
SKP1-206ENST00000519321 FOXD3Q9UJU5 478 aaPredicted RBP20.17■□□□□ 0.82
SKP1-206ENST00000519321 TRAV36DV7A0A075B6V5 113 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 IGHV3-15A0A0B4J1V0 119 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 NKX2-6A6NCS4 301 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 ARPC2O15144 300 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 YES1P07947 543 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 GTF2E2P29084 291 aaKnown RBP20.16■□□□□ 0.82
SKP1-206ENST00000519321 MSX2P35548 267 aaPredicted RBP20.16■□□□□ 0.82
SKP1-206ENST00000519321 SIRPAP78324 504 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 H3F3AP84243 136 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 BNIP1Q12981 228 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 MFSD13AQ14CX5 517 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 FBXL19-AS1Q494R0 122 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 FAM69AQ5T7M9 428 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 LINC00114Q6XXX2 140 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 STARD4Q96DR4 205 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 DNAJA3Q96EY1 480 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 PRRC1Q96M27 445 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 BCO1Q9HAY6 547 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 JKAMPQ9P055 326 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 EMC3Q9P0I2 261 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 ACTR3BQ9P1U1 418 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 SLC7A7Q9UM01 511 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 PROCRQ9UNN8 238 aa20.16■□□□□ 0.82
SKP1-206ENST00000519321 SPTBN1Q01082 2364 aaKnown RBP20.15■□□□□ 0.82
SKP1-206ENST00000519321 ZNF724A8MTY0 619 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 EEF1E1-BLOC1S5C9J1V9 151 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 MSTNO14793 375 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 EEF1E1O43324 174 aaKnown RBP20.15■□□□□ 0.82
SKP1-206ENST00000519321 STAMBPO95630 424 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 CD8BP10966 210 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 AGTR1P30556 359 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 RPS5P46782 204 aaKnown RBP20.15■□□□□ 0.82
SKP1-206ENST00000519321 ST3GAL3Q11203 375 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 MTX3Q5HYI7 312 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 ABLIM2Q6H8Q1 611 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 TTC33Q6PID6 262 aaPredicted RBP20.15■□□□□ 0.82
SKP1-206ENST00000519321 GDF7Q7Z4P5 450 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 POP5Q969H6 163 aaKnown RBP20.15■□□□□ 0.82
SKP1-206ENST00000519321 PSD2Q9BQI7 771 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 BTBD10Q9BSF8 475 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 SLC19A3Q9BZV2 496 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms