RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 NOP53Q9NZM5 478 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-203ENST00000517534 TMED7-TICAM2A0A0A6YYA0 188 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 SLC35F4A4IF30 521 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 ATP6V1G2-DDX39BF2Z307 99 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 HMGN4O00479 90 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 ZNF208O43345 1280 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 TYROBPO43914 113 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 LMX1BO60663 402 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 EIF1BO60739 113 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 CPSF4O95639 269 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 CHRM4P08173 479 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 IGFBP5P24593 272 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 MPGP29372 298 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 SLC1A3P43003 542 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 MAGEA8P43361 318 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 HTR3AP46098 478 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 SLC35A1P78382 337 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 CHRNB3Q05901 458 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 C1QTNF12Q5T7M4 302 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 ATAD3BQ5T9A4 648 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 PAQR6Q6TCH4 344 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 CASP12Q6UXS9 341 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 ARFGAP2Q8N6H7 521 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 ZNF781Q8N8C0 355 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 ANKFN1Q8N957 763 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 PMM1Q92871 262 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 TMEM45BQ96B21 275 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 TESCQ96BS2 214 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 PPP1R36Q96LQ0 422 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 ZIM3Q96PE6 472 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 NAA11Q9BSU3 229 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 C20orf27Q9GZN8 174 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 ADAM19Q9H013 955 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 SLC38A1Q9H2H9 487 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 FKRPQ9H9S5 495 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 PARPBPQ9NWS1 579 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 LPAR3Q9UBY5 353 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 PCDHGB4Q9UN71 923 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 MOKQ9UQ07 419 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 SLC9A8Q9Y2E8 581 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 AMDHD2Q9Y303 409 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 TMED7Q9Y3B3 224 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 PMF1-BGLAPU3KQ54 211 aa7.29□□□□□ -1.24
CTNNA1-203ENST00000517534 MALRD1Q5VYJ5 2156 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 IGHV1-18A0A0C4DH31 117 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 IGHV4-61A0A0C4DH41 118 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 AGAP5A6NIR3 686 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 LIPT2A6NK58 231 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 FAAHO00519 579 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 KLF11O14901 512 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 CSF3P09919 207 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 BMP4P12644 408 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 ZNF16P17020 682 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 RPS4Y1P22090 263 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 TACR3P29371 465 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 NR4A2P43354 598 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 GZMKP49863 264 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 P2RY4P51582 365 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 POLR2HP52434 150 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 PRPS1P60891 318 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 SRSF2Q01130 221 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 TGFBR3Q03167 851 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 MAPK11Q15759 364 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 PDCD2Q16342 344 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 SYPL1Q16563 259 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 GPAT3Q53EU6 434 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 HIKESHIQ53FT3 197 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 SPANXN4Q5MJ08 99 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 ANXA8L1Q5VT79 327 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 LRRC74BQ6ZQY2 392 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 RNF130Q86XS8 419 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 NUDCD3Q8IVD9 361 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 TMEM99Q8N816 258 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 OR9K2Q8NGE7 335 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.28□□□□□ -1.249e-7■■■■■ 89.5
CTNNA1-203ENST00000517534 DDIT4LQ96D03 193 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 MSI2Q96DH6 328 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 FBXO17Q96EF6 278 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 PKNOX2Q96KN3 472 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 TEX37Q96LM6 180 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 CCDC115Q96NT0 180 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 ZNF385AQ96PM9 386 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 SORCS2Q96PQ0 1159 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 TRNT1Q96Q11 434 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 SLC35A5Q9BS91 424 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 ROPN1BQ9BZX4 212 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 DPY30Q9C005 99 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 SHARPINQ9H0F6 387 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 ROPN1Q9HAT0 212 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 UPB1Q9UBR1 384 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 MARCOQ9UEW3 520 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 TENM1Q9UKZ4 2725 aa7.28□□□□□ -1.24
CTNNA1-203ENST00000517534 LOC100289279A0A1B0GTE1 492 aa7.27□□□□□ -1.25
CTNNA1-203ENST00000517534 CFAP73A6NFT4 308 aa7.27□□□□□ -1.25
CTNNA1-203ENST00000517534 NDUFS8O00217 210 aa7.27□□□□□ -1.25
CTNNA1-203ENST00000517534 AKR7A3O95154 331 aa7.27□□□□□ -1.25
CTNNA1-203ENST00000517534 SERPINE1P05121 402 aa7.27□□□□□ -1.25
CTNNA1-203ENST00000517534 IL12AP29459 219 aa7.27□□□□□ -1.25
CTNNA1-203ENST00000517534 ACAA2P42765 397 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-203ENST00000517534 KHKP50053 298 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms