RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 RASGEF1BQ0VAM2 473 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ALG11Q2TAA5 492 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ELFN2Q5R3F8 820 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 MRPL2Q5T653 305 aaKnown RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SLC48A1Q6P1K1 146 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 KCTD18Q6PI47 426 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 OR4N5Q8IXE1 308 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CDH26Q8IXH8 852 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CMTM4Q8IZR5 234 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 CLRN3Q8NCR9 226 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 DUSP19Q8WTR2 217 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SERINC2Q96SA4 455 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 ARHGDIGQ99819 225 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 UQCC2Q9BRT2 126 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 NKX6-2Q9C056 277 aaPredicted RBP6.18□□□□□ -1.42
CPNE3-203ENST00000517490 PIGMQ9H3S5 423 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 FBXL2Q9UKC9 423 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 FBXL3Q9UKT7 428 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 SLC6A5Q9Y345 797 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 PARP14Q460N5 1801 aa6.18□□□□□ -1.42
CPNE3-203ENST00000517490 LOC100509620A0A075B734 347 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 C1orf196B1AJZ1 125 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 P2RX6O15547 441 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 PLPP2O43688 288 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CSTAP01040 98 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 TSFMP43897 325 aaKnown RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CDKN3Q16667 212 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 LGALSLQ3ZCW2 172 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 Q499Y3 187 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CDNFQ49AH0 187 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CNKSR3Q6P9H4 555 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 GLDNQ6ZMI3 551 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 NAXDQ8IW45 347 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF440Q8IYI8 595 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 OR14C36Q8NHC7 312 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ABHD1Q96SE0 405 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ZDHHC5Q9C0B5 715 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 METTL8Q9H825 291 aaKnown RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ZC3H12DA2A288 527 aaKnown RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 H3BSH0 61 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 NARSO43776 548 aaKnown RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 PMS2P2O95744 297 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 IGHA1P01876 353 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 PBX2P40425 430 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 OR3A2P47893 321 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CLDN12P56749 244 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CSNK1G2P78368 415 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 INSL4Q14641 139 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 MEF2DQ14814 521 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 PLEKHN1Q494U1 663 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 TMEM81Q6P7N7 255 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CD200R1LQ6Q8B3 271 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF574Q6ZN55 896 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF836Q6ZNA1 936 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 GAREM2Q75VX8 874 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ZFPM2Q8WW38 1151 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 SMIM19Q96E16 107 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 LRFN5Q96NI6 719 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 SLC38A3Q99624 504 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CDCP1Q9H5V8 836 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 AUNIPQ9H7T9 357 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 SRA1Q9HD15 236 aaKnown RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 PRSS16Q9NQE7 514 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ACAD8Q9UKU7 415 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 PRELID3BQ9Y3B1 194 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 PLXNA1Q9UIW2 1896 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 TMEM82A0PJX8 343 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 MEGF11A6BM72 1044 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF736B4DX44 427 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CDK2AP1O14519 115 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 SEC14L5O43304 696 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 SIX6O95475 246 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 FUT1P19526 365 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 CXCL3P19876 107 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 S1PR1P21453 382 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 MAP2K6P52564 334 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 PCBP4P57723 403 aaKnown RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 FAM27D1Q5T7N8 215 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 MFSD12Q6NUT3 480 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ULK3Q6PHR2 472 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 LNX2Q8N448 690 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 SNIP1Q8TAD8 396 aaKnown RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 YIPF5Q969M3 257 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 MARC2Q969Z3 335 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ZBTB8AQ96BR9 441 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 KLHL15Q96M94 604 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 TNFRSF13CQ96RJ3 184 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 KCNJ15Q99712 375 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 SLC46A2Q9BY10 475 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 GHITMQ9H3K2 345 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 PRDM9Q9NQV7 894 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 NUP214P35658 2090 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-203ENST00000517490 LRIT2A6NDA9 550 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 OR5K3A6NET4 321 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 GPR89AB7ZAQ6 455 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 EEF1E1-BLOC1S5C9J1V9 151 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 MAN2B1O00754 1011 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 TGM5O43548 720 aa6.17□□□□□ -1.42
CPNE3-203ENST00000517490 GSTZ1O43708 216 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms