RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.09■□□□□ 0.172e-8■■□□□ 12.8
SPOP-220ENST00000515508 ANK2Q01484 3957 aa16.09■□□□□ 0.17
SPOP-220ENST00000515508 AGAP5A6NIR3 686 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 VWC2LB2RUY7 222 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 ATP6V1G2-DDX39BF2Z307 99 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 ITM2AO43736 263 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 LY6HO94772 140 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 CPSF4O95639 269 aaKnown RBP16.08■□□□□ 0.16
SPOP-220ENST00000515508 CCNA2P20248 432 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 MPGP29372 298 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 SLC1A3P43003 542 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 SWI5Q1ZZU3 235 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 KRTAP24-1Q3LI83 254 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 SPANXN4Q5MJ08 99 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 LSRQ86X29 649 aaPredicted RBP16.08■□□□□ 0.16
SPOP-220ENST00000515508 PPP1R36Q96LQ0 422 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 TRNT1Q96Q11 434 aaKnown RBP16.08■□□□□ 0.16
SPOP-220ENST00000515508 SLC35A5Q9BS91 424 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 NAA11Q9BSU3 229 aaPredicted RBP16.08■□□□□ 0.16
SPOP-220ENST00000515508 ROPN1BQ9BZX4 212 aaPredicted RBP16.08■□□□□ 0.16
SPOP-220ENST00000515508 SHARPINQ9H0F6 387 aa16.08■□□□□ 0.16
SPOP-220ENST00000515508 ROPN1Q9HAT0 212 aaPredicted RBP16.08■□□□□ 0.16
SPOP-220ENST00000515508 ZC3H12DA2A288 527 aaKnown RBP16.07■□□□□ 0.16
SPOP-220ENST00000515508 NDUFS8O00217 210 aa16.07■□□□□ 0.16
SPOP-220ENST00000515508 LMX1BO60663 402 aa16.07■□□□□ 0.16
SPOP-220ENST00000515508 C1QCP02747 245 aa16.07■□□□□ 0.16
SPOP-220ENST00000515508 RPS4Y1P22090 263 aaKnown RBP16.07■□□□□ 0.16
SPOP-220ENST00000515508 IGFBP5P24593 272 aa16.07■□□□□ 0.16
SPOP-220ENST00000515508 TACR3P29371 465 aa16.07■□□□□ 0.16
SPOP-220ENST00000515508 CHI3L1P36222 383 aaPredicted RBP16.07■□□□□ 0.16
SPOP-220ENST00000515508 PRPS1P60891 318 aa16.07■□□□□ 0.16
SPOP-220ENST00000515508 LSM11P83369 360 aaKnown RBP eCLIP16.07■□□□□ 0.16
SPOP-220ENST00000515508 MST1LQ2TV78 715 aa16.07■□□□□ 0.16
SPOP-220ENST00000515508 LRRC34Q8IZ02 419 aa16.07■□□□□ 0.16
SPOP-220ENST00000515508 CCDC115Q96NT0 180 aa16.07■□□□□ 0.16
SPOP-220ENST00000515508 SF3B5Q9BWJ5 86 aaKnown RBP16.07■□□□□ 0.16
SPOP-220ENST00000515508 E9PBE3 544 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 WNT11O96014 354 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 SERPINE1P05121 402 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 CHRM4P08173 479 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 GZMKP49863 264 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 CLNS1AP54105 237 aaKnown RBP16.06■□□□□ 0.16
SPOP-220ENST00000515508 TXNL4AP83876 142 aaKnown RBP16.06■□□□□ 0.16
SPOP-220ENST00000515508 IFFO1Q0D2I5 559 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 EPS8Q12929 822 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 SYPL1Q16563 259 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 KLHL24Q6TFL4 600 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 LRRC74BQ6ZQY2 392 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 NUDCD3Q8IVD9 361 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 ARIH2OSQ8N7S6 290 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 ANKFN1Q8N957 763 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 ZIC4Q8N9L1 334 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 POMGNT2Q8NAT1 580 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 WDR60Q8WVS4 1066 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 PKNOX2Q96KN3 472 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 SORCS2Q96PQ0 1159 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 PIF1Q9H611 641 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 OBP2BQ9NPH6 170 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 BTNL2Q9UIR0 455 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 MOKQ9UQ07 419 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 FKBP7Q9Y680 259 aa16.06■□□□□ 0.16
SPOP-220ENST00000515508 LIPT2A6NK58 231 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 AQP7P3A6NL99 342 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 GPIP06744 558 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 MYZAPP0CAP1 466 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 PDLIM4P50479 330 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 FAM174BQ3ZCQ3 159 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 OTUD3Q5T2D3 398 aaPredicted RBP16.05■□□□□ 0.16
SPOP-220ENST00000515508 MRPL2Q5T653 305 aaKnown RBP16.05■□□□□ 0.16
SPOP-220ENST00000515508 FAM166AQ6J272 317 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 RNF130Q86XS8 419 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 OR9K2Q8NGE7 335 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 FBXO17Q96EF6 278 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 ZNF385AQ96PM9 386 aaKnown RBP16.05■□□□□ 0.16
SPOP-220ENST00000515508 C20orf27Q9GZN8 174 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 ADAM19Q9H013 955 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 HAO1Q9UJM8 370 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 RAP2CQ9Y3L5 183 aa16.05■□□□□ 0.16
SPOP-220ENST00000515508 CFAP73A6NFT4 308 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 SNUPNO95149 360 aaKnown RBP16.04■□□□□ 0.16
SPOP-220ENST00000515508 UQCRBP14927 111 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 SRD5A1P18405 259 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 NR4A2P43354 598 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 ABCE1P61221 599 aaKnown RBP16.04■□□□□ 0.16
SPOP-220ENST00000515508 GNA13Q14344 377 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 CHI3L2Q15782 390 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 HIKESHIQ53FT3 197 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 ABHD12BQ7Z5M8 362 aaPredicted RBP16.04■□□□□ 0.16
SPOP-220ENST00000515508 TMEM99Q8N816 258 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 SORT1Q99523 831 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 PIMREGQ9BSJ6 248 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 PRR14Q9BWN1 585 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 MTHFD2LQ9H903 347 aaPredicted RBP16.04■□□□□ 0.16
SPOP-220ENST00000515508 MYOZ1Q9NP98 299 aaPredicted RBP16.04■□□□□ 0.16
SPOP-220ENST00000515508 PRDM4Q9UKN5 801 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 KCNS2Q9ULS6 477 aa16.04■□□□□ 0.16
SPOP-220ENST00000515508 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.04■□□□□ 0.16
SPOP-220ENST00000515508 IGHV1-18A0A0C4DH31 117 aa16.03■□□□□ 0.16
SPOP-220ENST00000515508 SLC35F4A4IF30 521 aa16.03■□□□□ 0.16
SPOP-220ENST00000515508 BIRC5O15392 142 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms