RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 OR10A6Q8NH74 314 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 KISS1RQ969F8 398 aaPredicted RBP10.17□□□□□ -0.78
VCAN-212ENST00000515397 SLC25A36Q96CQ1 311 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 ZHX1-C8orf76Q96EF9 292 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 KTI12Q96EK9 354 aaPredicted RBP10.17□□□□□ -0.78
VCAN-212ENST00000515397 PLPPR2Q96GM1 343 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 SAR1AQ9NR31 198 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 ARMCX1Q9P291 453 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 TRAPPC4Q9Y296 219 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 VPS13CQ709C8 3753 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 ARID1AO14497 2285 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 A0A1B0GWA3 101 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 LIPT2A6NK58 231 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 A8MVM7 634 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 TPST2O60704 377 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 MFN2O95140 757 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 RAF1P04049 648 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 ETS2P15036 469 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 CD53P19397 219 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 IGHV1-2P23083 117 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 IDUAP35475 653 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 RPS5P46782 204 aaKnown RBP10.16□□□□□ -0.78
VCAN-212ENST00000515397 PCYT1AP49585 367 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 H3F3AP84243 136 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 FAPQ12884 760 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 ITGADQ13349 1161 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 C1orf140Q5VVS0 124 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 PRAMEF8Q5VWM4 474 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 PRAMEF7Q5VXH5 474 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 METTL21CQ5VZV1 264 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 GPAT4Q86UL3 456 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 KRT73Q86Y46 540 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 RBM45Q8IUH3 476 aaKnown RBP10.16□□□□□ -0.78
VCAN-212ENST00000515397 HIPK4Q8NE63 616 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 STEAP2Q8NFT2 490 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 PIGXQ8TBF5 258 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 STON2Q8WXE9 905 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 NAA11Q9BSU3 229 aaPredicted RBP10.16□□□□□ -0.78
VCAN-212ENST00000515397 C1QTNF6Q9BXI9 259 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 POTEKPQ9BYX7 375 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 TMEM38AQ9H6F2 299 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 ARMC7Q9H6L4 198 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 GP6Q9HCN6 339 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 TMEM45AQ9NWC5 275 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 RPS6KB2Q9UBS0 482 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 SEC14L4Q9UDX3 406 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 USF3Q68DE3 2245 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 MED13LQ71F56 2210 aa10.16□□□□□ -0.78
VCAN-212ENST00000515397 SETD2Q9BYW2 2564 aaPredicted RBP10.16□□□□□ -0.78
VCAN-212ENST00000515397 ALPK2Q86TB3 2170 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 IGKV3D-15A0A087WSY6 115 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 ELOA3DA6NLF2 546 aaPredicted RBP10.15□□□□□ -0.78
VCAN-212ENST00000515397 CCT8L1PA6NM43 557 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 M0R3H8 397 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 MRPL33O75394 65 aaKnown RBP10.15□□□□□ -0.78
VCAN-212ENST00000515397 FKBP2P26885 142 aaKnown RBP10.15□□□□□ -0.78
VCAN-212ENST00000515397 PRKAR1BP31321 381 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 MDH1P40925 334 aaKnown RBP10.15□□□□□ -0.78
VCAN-212ENST00000515397 EGR4Q05215 589 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 LGALS3BPQ08380 585 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 FOXD4Q12950 439 aaPredicted RBP10.15□□□□□ -0.78
VCAN-212ENST00000515397 SLC17A1Q14916 467 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 OR1Q1Q15612 314 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 DUSP7Q16829 419 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 DEFB113Q30KQ7 82 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 ELOA3BQ3SY89 546 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 MMEL1Q495T6 779 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 NANOGP8Q6NSW7 305 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 DHRS4L2Q6PKH6 230 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 CASP12Q6UXS9 341 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 Q6ZT83 130 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 SNX32Q86XE0 403 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 ARMC8Q8IUR7 673 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 POU5F2Q8N7G0 328 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 ZIC4Q8N9L1 334 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 C11orf65Q8NCR3 313 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 ELOA3Q8NG57 546 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 GPR32P1Q8NGA4 272 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 NEUROG1Q92886 237 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 TAAR8Q969N4 342 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 APH1AQ96BI3 265 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 ZNF385AQ96PM9 386 aaKnown RBP10.15□□□□□ -0.78
VCAN-212ENST00000515397 ZNF607Q96SK3 696 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 SIKE1Q9BRV8 207 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 KAT8Q9H7Z6 458 aaKnown RBP10.15□□□□□ -0.78
VCAN-212ENST00000515397 NANOGQ9H9S0 305 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 FANCFQ9NPI8 374 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 EMC3Q9P0I2 261 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 GMPR2Q9P2T1 348 aaKnown RBP10.15□□□□□ -0.78
VCAN-212ENST00000515397 FLVCR1Q9Y5Y0 555 aa10.15□□□□□ -0.78
VCAN-212ENST00000515397 ZNF469Q96JG9 3925 aaPredicted RBP10.14□□□□□ -0.79
VCAN-212ENST00000515397 CIB4A0PJX0 185 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 TMEM229AB2RXF0 380 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 LRRN3E7EW58 273 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 MRASO14807 208 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 CLOCKO15516 846 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 EIF1BO60739 113 aaKnown RBP10.14□□□□□ -0.79
VCAN-212ENST00000515397 NPIPB7O75200 414 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 RAD51DO75771 328 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 GPIP06744 558 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms