RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZNF283Q8N7M2 679 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 MRPL43Q8N983 215 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 CNIH3Q8TBE1 160 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM120BQ96EK7 910 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 PYURFQ96I23 114 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 F2RL3Q96RI0 385 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ALG8Q9BVK2 526 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 SPATA5L1Q9BVQ7 753 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 BARHL1Q9BZE3 327 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 NXF2Q9GZY0 626 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 CHODLQ9H9P2 273 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 IL36AQ9UHA7 158 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 OPN4Q9UHM6 478 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 DNAH14Q0VDD8 3507 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 SZT2Q5T011 3432 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 PRAMEF33A0A0G2JMD5 474 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 TBC1D3FA6NER0 549 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 RFXANKO14593 260 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ATXN7O15265 892 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 PRAMEF10O60809 474 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 KCNK5O95279 499 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 PMP2P02689 132 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 GPX2P18283 190 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 MAP2K3P46734 347 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 POM121L1PQ3SYA9 428 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 TCEAL5Q5H9L2 206 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 FBXW9Q5XUX1 488 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 CPZQ66K79 652 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ABLIM2Q6H8Q1 611 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 GRHL2Q6ISB3 625 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM199XQ6PEV8 388 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 CLECL1Q8IZS7 167 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 VN1R2Q8NFZ6 395 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ZCCHC10Q8TBK6 192 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 CSGALNACT1Q8TDX6 532 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 FBLIM1Q8WUP2 373 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ACOT12Q8WYK0 555 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF48Q96MX3 618 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 MTERF1Q99551 399 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 RHNO1Q9BSD3 238 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ADAT1Q9BUB4 502 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ELOVL1Q9BW60 279 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 GABARAPL1Q9H0R8 117 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 PTGES2Q9H7Z7 377 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 CERS4Q9HA82 394 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 PDP1Q9P0J1 537 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 EXO1Q9UQ84 846 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 SH2B3Q9UQQ2 575 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 C1orf226A1L170 272 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 TMEM229AB2RXF0 380 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 PRR23D1E9PI22 279 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 FLRT2O43155 660 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 SIAH2O43255 324 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 RGS9O75916 674 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 FADS2O95864 444 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 SLC16A8O95907 504 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 GIMD1P0DJR0 217 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 PRR23D2P0DMB1 279 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 DNASE1P24855 282 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 NNMTP40261 264 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 NAA10P41227 235 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 KIR3DL1P43629 444 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 CEBPGP53567 150 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ISL1P61371 349 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 LSM11P83369 360 aaKnown RBP eCLIP6.92□□□□□ -1.31e-7■■■■■ 32.8
PDLIM5-219ENST00000514743 CD47Q08722 323 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 GTF2H3Q13889 308 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 PEA15Q15121 130 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 DUOXA1Q1HG43 343 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 XKR6Q5GH73 641 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 LEMD1Q68G75 181 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 HIST2H2AA3Q6FI13 130 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 KIAA1211LQ6NV74 962 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ULK3Q6PHR2 472 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 AGTRAPQ6RW13 159 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 ALKAL2Q6UX46 152 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 GLYATL1Q969I3 302 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 HIPK2Q9H2X6 1198 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 SMURF1Q9HCE7 757 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 EMC7Q9NPA0 242 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 SERINC1Q9NRX5 453 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 C2orf42Q9NWW7 574 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 VPS29Q9UBQ0 182 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 TCFL5Q9UL49 500 aa6.92□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM240BA0A1B0GVZ2 78 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 A0A1W2PPH5 198 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 LNP1A1A4G5 178 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 MAGEB17A8MXT2 336 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 MYO1GB0I1T2 1018 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 AP4M1O00189 453 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 SLC1A7O00341 560 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 PPIHO43447 177 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 CTAG2O75638 210 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF682O95780 498 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 LAMP1P11279 417 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 EPCAMP16422 314 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 TNFSF8P32971 234 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 RORCP51449 518 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 AP3S2P59780 193 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms