RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 C6orf89Q6UWU4 347 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 MEX3BQ6ZN04 569 aaKnown RBP12.44□□□□□ -0.42
USP46-209ENST00000514536 CARM1Q86X55 608 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 CCDC103Q8IW40 242 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 PGAM4Q8N0Y7 254 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 ZNF610Q8N9Z0 462 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 STK35Q8TDR2 534 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 ZNF775Q96BV0 537 aaPredicted RBP12.44□□□□□ -0.42
USP46-209ENST00000514536 SLC47A1Q96FL8 570 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 LRRC46Q96FV0 321 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 TPD52L3Q96J77 140 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 CDRT15Q96T59 188 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 RBM24Q9BX46 236 aaKnown RBP12.44□□□□□ -0.42
USP46-209ENST00000514536 ENKD1Q9H0I2 346 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 OPN3Q9H1Y3 402 aaPredicted RBP12.44□□□□□ -0.42
USP46-209ENST00000514536 C12orf10Q9HB07 376 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 PROCRQ9UNN8 238 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 A0A0B4J2E0 115 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 A0A1B0GX12 115 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 LIPT2A6NK58 231 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 A8MXE2 369 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 MSTNO14793 375 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 CYTIPO60759 359 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 FMO6PO60774 539 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 NPIPB7O75200 414 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 PNMTP11086 282 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 AGTR1P30556 359 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 OR1E2P47887 323 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 CDH12P55289 794 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 SELENOWP63302 87 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 OR7A5Q15622 319 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 TMEM201Q5SNT2 666 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 C16orf89Q6UX73 402 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 P3H2Q8IVL5 708 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 DEFB107AQ8IZN7 70 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 SLC38A4Q969I6 547 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 PLSCR4Q9NRQ2 329 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 ADPRHL2Q9NX46 363 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 KLHL9Q9P2J3 617 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 EGFL7Q9UHF1 273 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 CACNA1CQ13936 2221 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 A0A087WUJ7 227 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 ZNF814B7Z6K7 855 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 DNPH1O43598 174 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 AHSA1O95433 338 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 ZNF682O95780 498 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 GPIP06744 558 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 YES1P07947 543 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 T-ENOLP0DO92 83 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 CD8BP10966 210 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 IGFBP2P18065 325 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 GGT1P19440 569 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 TCN1P20061 433 aaPredicted RBP12.43□□□□□ -0.42
USP46-209ENST00000514536 RPS5P46782 204 aaKnown RBP12.43□□□□□ -0.42
USP46-209ENST00000514536 EGR4Q05215 589 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 GLYATQ6IB77 296 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 ZNF613Q6PF04 617 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 ZNF474Q6S9Z5 364 aaPredicted RBP12.43□□□□□ -0.42
USP46-209ENST00000514536 NUFIP2Q7Z417 695 aaKnown RBP12.43□□□□□ -0.42
USP46-209ENST00000514536 ACBD4Q8NC06 268 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 FAM156AQ8NDB6 213 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 OR6K3Q8NGY3 331 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 LZICQ8WZA0 190 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 FAM162AQ96A26 154 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 KTI12Q96EK9 354 aaPredicted RBP12.43□□□□□ -0.42
USP46-209ENST00000514536 ZNF300Q96RE9 604 aaPredicted RBP12.43□□□□□ -0.42
USP46-209ENST00000514536 SPOCK3Q9BQ16 436 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 PSD2Q9BQI7 771 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 NAA11Q9BSU3 229 aaPredicted RBP12.43□□□□□ -0.42
USP46-209ENST00000514536 TAPBPLQ9BX59 468 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 C12orf49Q9H741 205 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 NDE1Q9NXR1 346 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 KLHL13Q9P2N7 655 aa12.43□□□□□ -0.42
USP46-209ENST00000514536 FOXD3Q9UJU5 478 aaPredicted RBP12.43□□□□□ -0.42
USP46-209ENST00000514536 ING1Q9UK53 422 aaPredicted RBP12.43□□□□□ -0.42
USP46-209ENST00000514536 INTS1Q8N201 2190 aaKnown RBP12.42□□□□□ -0.42
USP46-209ENST00000514536 IGKV1D-42A0A075B6H8 117 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 HNRNPRO43390 633 aaKnown RBP12.42□□□□□ -0.42
USP46-209ENST00000514536 EIF1BO60739 113 aaKnown RBP12.42□□□□□ -0.42
USP46-209ENST00000514536 RAMP1O60894 148 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 AKR7A3O95154 331 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 SERPINA1P01009 418 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 PTNP21246 168 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 H3F3AP84243 136 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 SAMD4BQ5PRF9 694 aaKnown RBP12.42□□□□□ -0.42
USP46-209ENST00000514536 DEF8Q6ZN54 512 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 RINLQ6ZS11 566 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 TRPM8Q7Z2W7 1104 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 VTCN1Q7Z7D3 282 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 TSPYL5Q86VY4 417 aaPredicted RBP12.42□□□□□ -0.42
USP46-209ENST00000514536 DMRTC2Q8IXT2 367 aaPredicted RBP12.42□□□□□ -0.42
USP46-209ENST00000514536 TMEM99Q8N816 258 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 PIGXQ8TBF5 258 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 ADAMTS16Q8TE57 1224 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 MARVELD3Q96A59 401 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 SLC25A36Q96CQ1 311 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 BCO1Q9HAY6 547 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 GP6Q9HCN6 339 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 GALNT8Q9NY28 637 aa12.42□□□□□ -0.42
USP46-209ENST00000514536 CD300AQ9UGN4 299 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms