RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, human

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFC-208	ENST00000512711	C15orf54	Q8N8G6	183 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	CATSPER1	Q8NEC5	780 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	OR5W2	Q8NH69	310 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	FCGR1B	Q92637	280 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	FGF11	Q92914	225 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	CDX2	Q99626	313 aa	Predicted RBP	0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	SLC6A7	Q99884	636 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	P2RY13	Q9BPV8	354 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	SLC30A2	Q9BRI3	323 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	DUSP16	Q9BY84	665 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	XPO4	Q9C0E2	1151 aa	Known RBP	0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	ROGDI	Q9GZN7	287 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	ZNF385D	Q9H6B1	395 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	SLC40A1	Q9NP59	571 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	ZNF226	Q9NYT6	803 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	CARHSP1	Q9Y2V2	147 aa	Known RBP	0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	RFNG	Q9Y644	331 aa		0.92	□□□□□ -2.26
PDGFC-208	ENST00000512711	GPATCH8	Q9UKJ3	1502 aa	Known RBP	0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	MYO16	Q9Y6X6	1858 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	IGHV1OR21-1	A0A087WYE8	117 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711		A0A1B0GUS0	222 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	SYCE3	A1L190	88 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	PLAC8L1	A1L4L8	177 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	SLC9B1P1	A6NJY1	282 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	ZNF705G	A8MUZ8	300 aa	Predicted RBP	0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711		E7ESA3	106 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	AGPAT2	O15120	278 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	MSH4	O15457	936 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	MBTPS2	O43462	519 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	KERA	O60938	352 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	STAMBP	O95630	424 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	ADRA2A	P08913	450 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	SFN	P31947	248 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	LEP	P41159	167 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	PTGDS	P41222	190 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	KIR2DS4	P43632	304 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	ARRB1	P49407	418 aa	Predicted RBP	0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	ARF5	P84085	180 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	CNTN2	Q02246	1040 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	GUCA2B	Q16661	112 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	BCL7A	Q4VC05	210 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	DNLZ	Q5SXM8	178 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	C12orf60	Q5U649	245 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	TIGD3	Q6B0B8	471 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	ANKRD23	Q86SG2	305 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	FTMT	Q8N4E7	242 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	C15orf56	Q8N910	161 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	OR4F15	Q8NGB8	312 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	ZNF461	Q8TAF7	563 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	SYNPR	Q8TBG9	265 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	PNPT1	Q8TCS8	783 aa	Known RBP	0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	MCOLN3	Q8TDD5	553 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	GIPC3	Q8TF64	312 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	TCTEX1D2	Q8WW35	142 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	ZCCHC13	Q8WW36	166 aa	Known RBP	0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	SMARCD2	Q92925	531 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	HPDL	Q96IR7	371 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	OR10C1	Q96KK4	312 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	BMF	Q96LC9	184 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	RHBG	Q9H310	441 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	DHX33	Q9H6R0	707 aa	Known RBP	0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	SUDS3	Q9H7L9	328 aa	Predicted RBP	0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	ROPN1	Q9HAT0	212 aa	Predicted RBP	0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	SOHLH2	Q9NX45	425 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	RDH8	Q9NYR8	311 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	ATP6V1H	Q9UI12	483 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	SPACA6	W5XKT8	324 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	NID2	Q14112	1375 aa		0.91	□□□□□ -2.26
PDGFC-208	ENST00000512711	UBE4B	O95155	1302 aa		0.9	□□□□□ -2.26
PDGFC-208	ENST00000512711	FRMPD4	Q14CM0	1322 aa		0.9	□□□□□ -2.26
PDGFC-208	ENST00000512711	LTBP4	Q8N2S1	1624 aa		0.9	□□□□□ -2.26
PDGFC-208	ENST00000512711	IGKV3D-11	A0A0A0MRZ8	115 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	C7orf66	A4D0T2	115 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	ARHGAP42	A6NI28	874 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	UGT2B17	O75795	530 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	MPZL1	O95297	269 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	PNP	P00491	289 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	RRAS	P10301	218 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	FUT1	P19526	365 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	SHMT2	P34897	504 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	PTGFR	P43088	359 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	EWSR1	Q01844	656 aa	Known RBP eCLIP	0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	CBX3	Q13185	183 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	KIAA0087	Q14695	138 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	TRIP10	Q15642	601 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	UBE2S	Q16763	222 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	RFX4	Q33E94	735 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	CCDC40	Q4G0X9	1142 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	LRRC10	Q5BKY1	277 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	RAET1L	Q5VY80	246 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	MIER3	Q7Z3K6	550 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	RABEPK	Q7Z6M1	372 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	TPRA1	Q86W33	373 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	THOC6	Q86W42	341 aa	Known RBP	0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	GRAMD2A	Q8IUY3	354 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	UBALD2	Q8IYN6	164 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	ZNF679	Q8IYX0	411 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	FAM71C	Q8NEG0	241 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	OR5AU1	Q8NGC0	362 aa		0.9	□□□□□ -2.27
PDGFC-208	ENST00000512711	OR5L2	Q8NGL0	311 aa		0.9	□□□□□ -2.27

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