RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 HDAC3O15379 428 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 BCAS1O75363 584 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 RAD51DO75771 328 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 WNT11O96014 354 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 EPHA3P29320 983 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 S100A3P33764 101 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 CLNS1AP54105 237 aaKnown RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 NME5P56597 212 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 MAGOHP61326 146 aaKnown RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 LRRC74AQ0VAA2 488 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 GSTA3Q16772 222 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 BEND6Q5SZJ8 279 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 TYW3Q6IPR3 259 aaKnown RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 TNFAIP8L2Q6P589 184 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 SPATA19Q7Z5L4 167 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 ARFGAP2Q8N6H7 521 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 ZNF540Q8NDQ6 660 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 MGARPQ8TDB4 240 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 FAM168AQ92567 244 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 ROPN1LQ96C74 230 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 DDIT4LQ96D03 193 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 ZNF317Q96PQ6 595 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 SLC35A5Q9BS91 424 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 SF3B5Q9BWJ5 86 aaKnown RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 MTHFD2LQ9H903 347 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 TMBIM4Q9HC24 238 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 CTPS2Q9NRF8 586 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 BTNL2Q9UIR0 455 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 ANK3Q12955 4377 aaKnown RBP11.04□□□□□ -0.64
VEGFA-216ENST00000512683 CADP27708 2225 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 OR6C65A6NJZ3 312 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 HMGN4O00479 90 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 KITP10721 976 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-216ENST00000512683 UQCRBP14927 111 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 USF1P22415 310 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-216ENST00000512683 EDNRAP25101 427 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 MPGP29372 298 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 CDKN2CP42773 168 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 SLC1A3P43003 542 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 GZMKP49863 264 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 ZNF83P51522 516 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 OR2B6P58173 313 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 PRPS1P60891 318 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 PLAURQ03405 335 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 CHRNEQ04844 493 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 ZSWIM7Q19AV6 140 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 PAQR6Q6TCH4 344 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 FRRS1Q6ZNA5 592 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 MAVSQ7Z434 540 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 ABHD12BQ7Z5M8 362 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-216ENST00000512683 PHC2Q8IXK0 858 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 WDR31Q8NA23 367 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 POMGNT2Q8NAT1 580 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 OR52N5Q8NH56 324 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 C10orf105Q8TEF2 133 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 TMEM45BQ96B21 275 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 MAELQ96JY0 434 aaKnown RBP11.03□□□□□ -0.64
VEGFA-216ENST00000512683 ARL5BQ96KC2 179 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 TRNT1Q96Q11 434 aaKnown RBP11.03□□□□□ -0.64
VEGFA-216ENST00000512683 OR52E6Q96RD3 313 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 MYOZ1Q9NP98 299 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-216ENST00000512683 SLC17A5Q9NRA2 495 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 UPB1Q9UBR1 384 aa11.03□□□□□ -0.64
VEGFA-216ENST00000512683 MARCOQ9UEW3 520 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-216ENST00000512683 CCDC154A6NI56 674 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 TRPC5OSA6NMA1 111 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 GPRIN2O60269 458 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 VAMP5O95183 116 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 PGRP06401 933 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 ITGA5P08648 1049 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 NTF4P34130 210 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 CHI3L1P36222 383 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-216ENST00000512683 IDH2P48735 452 aaKnown RBP11.02□□□□□ -0.65
VEGFA-216ENST00000512683 KHKP50053 298 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 POLR2HP52434 150 aaKnown RBP11.02□□□□□ -0.65
VEGFA-216ENST00000512683 LSM11P83369 360 aaKnown RBP eCLIP11.02□□□□□ -0.653e-17■■□□□ 12.5
VEGFA-216ENST00000512683 HPCAP84074 193 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 SLC17A1Q14916 467 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 SLC9B1Q4ZJI4 515 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 HMGN2P46Q86SG4 172 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 RNF130Q86XS8 419 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 ZNF440Q8IYI8 595 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 TRIML2Q8N7C3 387 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 NANOS1Q8WY41 292 aaKnown RBP11.02□□□□□ -0.65
VEGFA-216ENST00000512683 PANX1Q96RD7 426 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 SHARPINQ9H0F6 387 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 MANSC1Q9H8J5 431 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 SLC6A13Q9NSD5 602 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 FLVCR1Q9Y5Y0 555 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 ATP23Q9Y6H3 246 aa11.02□□□□□ -0.65
VEGFA-216ENST00000512683 TMED7-TICAM2A0A0A6YYA0 188 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 AGAP5A6NIR3 686 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 CLDN24A6NM45 220 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 VSTM5A8MXK1 200 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 M0R1B8 84 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 PHF1O43189 567 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-216ENST00000512683 LMX1BO60663 402 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 IGHV3-9P01782 118 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms