RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 RASSF5Q8WWW0 418 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 C22orf15Q8WYQ4 148 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 FAM136AQ96C01 138 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZFP3Q96NJ6 502 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 NKX3-1Q99801 234 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 AGPAT1Q99943 283 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 NUDT9Q9BW91 350 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 LAT2Q9GZY6 243 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZSCAN16Q9H4T2 348 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 GPN2Q9H9Y4 310 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 TNFRSF12AQ9NP84 129 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 IL23AQ9NPF7 189 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZNF446Q9NWS9 450 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 USE1Q9NZ43 259 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 MRTO4Q9UKD2 239 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 HEY1Q9Y5J3 304 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 MED23Q9ULK4 1368 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 TAF1P21675 1872 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 NKX6-3A6NJ46 265 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZNF729A6NN14 1252 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 B4DGG1 531 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 LAD1O00515 517 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 IMPA2O14732 288 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 WISP2O76076 250 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 IGF1P05019 195 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 MELTFP08582 738 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 GSTA2P09210 222 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 ELK4P28324 431 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 DUSP1P28562 367 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 SLC1A1P43005 524 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 KIR2DL2P43627 348 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 CYP2J2P51589 502 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 RBX1P62877 108 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 FLI1Q01543 452 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 SPHARQ15513 63 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 DUOXA1Q1HG43 343 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 PLEKHN1Q494U1 663 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 TP53I3Q53FA7 332 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 BRMS1LQ5PSV4 323 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 METTL21CQ5VZV1 264 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 LCN10Q6JVE6 187 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 UNQ6126/PRO20091Q6UXV3 157 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 TMEM132CQ8N3T6 1108 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 KLHDC1Q8N7A1 406 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 INO80EQ8NBZ0 244 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 ACVR1CQ8NER5 493 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 LYPD6BQ8NI32 183 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 SHKBP1Q8TBC3 707 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 GATAD1Q8WUU5 269 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 SNX18Q96RF0 628 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 EBNA1BP2Q99848 306 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 MAPKAP1Q9BPZ7 522 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 FAM234AQ9H0X4 552 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 TRABDQ9H4I3 376 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 ANKRD19PQ9H560 264 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 HRASLSQ9HDD0 168 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 MIOSQ9NXC5 875 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 IKZF2Q9UKS7 526 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 LAMP3Q9UQV4 416 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 TCAF1Q9Y4C2 921 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 V9GYY9 64 aa5.63□□□□□ -1.51
TRAPPC11-209ENST00000512476 A0A0J9YVX5 310 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 FRG2CA6NGY1 282 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZNF98A6NK75 572 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 SHISA7A6NL88 538 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 GOSR2O14653 212 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 ARPC5O15511 151 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 SYNGR3O43761 229 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 ENSAO43768 121 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 CD5P06127 495 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 MGMTP16455 207 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 C21orf33P30042 268 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 CEACAM6P40199 344 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 TMEM50BP56557 158 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 SULT2A1Q06520 285 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 C2orf80Q0P641 193 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 MESP2Q0VG99 397 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 TMEM132DQ14C87 1099 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 PON3Q15166 354 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 EZH2Q15910 746 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 GUK1Q16774 197 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 RPEL1Q2QD12 228 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 GLYR1Q49A26 553 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 EARS2Q5JPH6 523 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZNF474Q6S9Z5 364 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 LINGO2Q7L985 606 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 OR2V1Q8NHB1 315 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 U2AF1L4Q8WU68 220 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 KCTD4Q8WVF5 259 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 LZICQ8WZA0 190 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 C8orf44Q96CB5 159 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 SLC38A3Q99624 504 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 GANQ9H2C0 597 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 ISYNA1Q9NPH2 558 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 ASB6Q9NWX5 421 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 B3GAT1Q9P2W7 334 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 VWA7Q9Y334 891 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 NDUFAF1Q9Y375 327 aa5.62□□□□□ -1.51
TRAPPC11-209ENST00000512476 NRXN2Q9P2S2 1712 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms