RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 DCTN4Q9UJW0 460 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 ADAM29Q9UKF5 820 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 ICAM5Q9UMF0 924 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 POLR3HQ9Y535 204 aaPredicted RBP7.89□□□□□ -1.15
NUP54-211ENST00000512151 PCDHB14Q9Y5E9 798 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 TENM3Q9P273 2699 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 ARHGAP32A7KAX9 2087 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 TRAV20A0A0B4J274 112 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 A0A1W2PNR3 127 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 TMEM129A0AVI4 362 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 TRPC5OSA6NMA1 111 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 ZNF724A8MTY0 619 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 PIN1P1O15428 100 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 PCDH7O60245 1069 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 PLOD3O60568 738 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 CYTIPO60759 359 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 DNAJC8O75937 253 aaPredicted RBP7.88□□□□□ -1.15
NUP54-211ENST00000512151 PRSS23O95084 383 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 DDX5P17844 614 aaKnown RBP7.88□□□□□ -1.15
NUP54-211ENST00000512151 OMGP23515 440 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 TIA1P31483 386 aaKnown RBP eCLIP7.88□□□□□ -1.15
NUP54-211ENST00000512151 PRIM2P49643 509 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 CLK3P49761 638 aaKnown RBP7.88□□□□□ -1.15
NUP54-211ENST00000512151 RPL38P63173 70 aaKnown RBP7.88□□□□□ -1.15
NUP54-211ENST00000512151 IL1RL1Q01638 556 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 DECR1Q16698 335 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 PRSS53Q2L4Q9 553 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 C9orf135Q5VTT2 229 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 IL23RQ5VWK5 629 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 NOXRED1Q6NXP6 359 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 GALNT18Q6P9A2 607 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 VHLLQ6RSH7 139 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 KIRREL3Q8IZU9 778 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 UBE2J2Q8N2K1 259 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 SLC43A2Q8N370 569 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 ATP6V1C2Q8NEY4 427 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 OR4C3Q8NH37 302 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 ACTRT2Q8TDY3 377 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 C10orf82Q8WW14 230 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 NEU4Q8WWR8 484 aaPredicted RBP7.88□□□□□ -1.15
NUP54-211ENST00000512151 ERP27Q96DN0 273 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 PPP3R2Q96LZ3 170 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 DOK1Q99704 481 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 CCT7Q99832 543 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 C1orf50Q9BV19 199 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 TMEM120AQ9BXJ8 343 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 PFDN4Q9NQP4 134 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 CA10Q9NS85 328 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 NMRK1Q9NWW6 199 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 AHSPQ9NZD4 102 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 KLHL14Q9P2G3 628 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 OPN4Q9UHM6 478 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 BAIAP2L1Q9UHR4 511 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 UTS2RQ9UKP6 389 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 CORINQ9Y5Q5 1042 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 ZNF780BQ9Y6R6 833 aa7.88□□□□□ -1.15
NUP54-211ENST00000512151 IGHV1-18A0A0C4DH31 117 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 A0A0G2JND7 137 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 PDLIM1O00151 329 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 OIP5O43482 229 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 OXSR1O95747 527 aaPredicted RBP7.87□□□□□ -1.15
NUP54-211ENST00000512151 SAGP10523 405 aaPredicted RBP7.87□□□□□ -1.15
NUP54-211ENST00000512151 BCKDHAP12694 445 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 LBPP18428 481 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 SDC1P18827 310 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 ZNF41P51814 821 aaPredicted RBP7.87□□□□□ -1.15
NUP54-211ENST00000512151 KRTAP10-3P60369 221 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 EMX2Q04743 252 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 ACSM2AQ08AH3 577 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 ZP4Q12836 540 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 ATP6AP1LQ52LC2 224 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 SPIN4Q56A73 249 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 ACSM2BQ68CK6 577 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 OGFOD2Q6N063 350 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 GALNT5Q7Z7M9 940 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 ZAR1Q86SH2 424 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 HOMEZQ8IX15 550 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 FNDC5Q8NAU1 212 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 SLC16A11Q8NCK7 471 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 OR52E4Q8NGH9 312 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 CEP70Q8NHQ1 597 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 FBXO27Q8NI29 283 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 ZFP90Q8TF47 636 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 C16orf78Q8WTQ4 265 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 WFDC12Q8WWY7 111 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 CCDC28BQ9BUN5 200 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 TAS2R16Q9NYV7 291 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 CAPN7Q9Y6W3 813 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 RYR2Q92736 4967 aa7.87□□□□□ -1.15
NUP54-211ENST00000512151 ALG1L2C9J202 215 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 E9PBE3 544 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 hCG_2039718K7EN88 272 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 ANKRD28O15084 1053 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 TFP02787 698 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 ANXA4P09525 319 aaPredicted RBP7.86□□□□□ -1.15
NUP54-211ENST00000512151 TROVE2P10155 538 aaKnown RBP eCLIP7.86□□□□□ -1.15
NUP54-211ENST00000512151 G6PDP11413 515 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 COL8A2P25067 703 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 RAC3P60763 192 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 PTGR1Q14914 329 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms