RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 MYPOPQ86VE0 399 aaPredicted RBP11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 ADGRG3Q86Y34 549 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 POMGNT2Q8NAT1 580 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 OR4F15Q8NGB8 312 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 CLDND2Q8NHS1 167 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 SFXN5Q8TD22 340 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 FAHD2AQ96GK7 314 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 ZNF385AQ96PM9 386 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 ALKBH3Q96Q83 286 aaPredicted RBP11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 FMO2Q99518 471 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 DOK1Q99704 481 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 TUBB1Q9H4B7 451 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 SERHL2Q9H4I8 314 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 OBP2BQ9NPH6 170 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 TMEM45AQ9NWC5 275 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 GIMAP2Q9UG22 337 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 ATP6V1HQ9UI12 483 aa11.44□□□□□ -0.58
POLR2J3-216ENST00000511773 VWFP04275 2813 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 LOC105371242A0A075B767 164 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 TMED7-TICAM2A0A0A6YYA0 188 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 EIF1BO60739 113 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 SAGP10523 405 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 IMPDH2P12268 514 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 IDH2P48735 452 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 CLK1P49759 484 aaKnown RBP11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 ATP6AP1LQ52LC2 224 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 OTUD3Q5T2D3 398 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 EMBQ6PCB8 327 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 ABHD12BQ7Z5M8 362 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 GPAT4Q86UL3 456 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 CARM1Q86X55 608 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 DDIASQ8IXT1 998 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 CLEC4FQ8N1N0 589 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 NUP37Q8NFH4 326 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 OR9K2Q8NGE7 335 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 PSMA8Q8TAA3 256 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 CKAP2Q8WWK9 683 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 IFT81Q8WYA0 676 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 TMEM45BQ96B21 275 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 DDIT4LQ96D03 193 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 TREM2Q9NZC2 230 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 FBXO9Q9UK97 447 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 PYCARDQ9ULZ3 195 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 TMED5Q9Y3A6 229 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 TMED7Q9Y3B3 224 aa11.43□□□□□ -0.58
POLR2J3-216ENST00000511773 NOTCH1P46531 2555 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 TMEM129A0AVI4 362 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 TMEM72A0PK05 275 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 ZC3H12DA2A288 527 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 OR6C65A6NJZ3 312 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 ZNF587BE7ETH6 402 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 AP3D1O14617 1153 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 WNT9BO14905 357 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 AZIN1O14977 448 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 URI1O94763 535 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 AKR7A3O95154 331 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 IGFBP1P08833 259 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 FKBP2P26885 142 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 CASQ1P31415 396 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 LIMS1P48059 325 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 PTGR1Q14914 329 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 LSM12Q3MHD2 195 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 FAM153CQ494X1 144 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 MIDNQ504T8 468 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 PAQR6Q6TCH4 344 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 USP43Q70EL4 1123 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 ZIC4Q8N9L1 334 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 FAM71CQ8NEG0 241 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 OR51F2Q8NH61 342 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 BCL2L2Q92843 193 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 MOAP1Q96BY2 351 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 ANKRD27Q96NW4 1050 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 JMJD8Q96S16 334 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 SLC6A7Q99884 636 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 C1orf50Q9BV19 199 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 ZNF350Q9GZX5 532 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 TSPYL1Q9H0U9 437 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 ATAD3AQ9NVI7 634 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 PCDHGB4Q9UN71 923 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 TRAPPC4Q9Y296 219 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 SLC35A3Q9Y2D2 325 aa11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 PRKDCP78527 4128 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-216ENST00000511773 CLDN24A6NM45 220 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 VSTM5A8MXK1 200 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 TMEM114B3SHH9 223 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 TMEM233B4DJY2 109 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 CHEK2O96017 543 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 AK1P00568 194 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 IGLV1-44P01699 117 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 PROCP04070 461 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 TCN1P20061 433 aaPredicted RBP11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 MATN1P21941 496 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 RPL3P39023 403 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 GPR6P46095 362 aaPredicted RBP11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 KHKP50053 298 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 ARFIP2P53365 341 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 NAA20P61599 178 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 NPRL3Q12980 569 aa11.41□□□□□ -0.58
POLR2J3-216ENST00000511773 SNTB2Q13425 540 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms