RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 HCAR1Q9BXC0 346 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 LIN7BQ9HAP6 207 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 TREM1Q9NP99 234 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.78□□□□□ -0.2
USP38-202ENST00000510377 TMEM229AB2RXF0 380 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 ZNF593O00488 134 aaPredicted RBP13.78□□□□□ -0.2
USP38-202ENST00000510377 MYOGP15173 224 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 ATF1P18846 271 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 NFYAP23511 347 aaPredicted RBP13.78□□□□□ -0.2
USP38-202ENST00000510377 RPS15AP62244 130 aaKnown RBP13.78□□□□□ -0.2
USP38-202ENST00000510377 C1orf61Q13536 156 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 BTN2A1Q7KYR7 527 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 ZBTB44Q8NCP5 570 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 CCDC107Q8WV48 283 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 CMKLR1Q99788 373 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 SLC17A9Q9BYT1 436 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 CAMK2AQ9UQM7 478 aa13.78□□□□□ -0.2
USP38-202ENST00000510377 PRKNO60260 465 aaPredicted RBP13.77□□□□□ -0.2
USP38-202ENST00000510377 RNGTTO60942 597 aaKnown RBP13.77□□□□□ -0.2
USP38-202ENST00000510377 OLFM2O95897 454 aa13.77□□□□□ -0.2
USP38-202ENST00000510377 WNT1P04628 370 aa13.77□□□□□ -0.2
USP38-202ENST00000510377 ATP1B1P05026 303 aa13.77□□□□□ -0.2
USP38-202ENST00000510377 AADACL4Q5VUY2 407 aa13.77□□□□□ -0.2
USP38-202ENST00000510377 COMTD1Q86VU5 262 aa13.77□□□□□ -0.2
USP38-202ENST00000510377 CMTM4Q8IZR5 234 aa13.77□□□□□ -0.2
USP38-202ENST00000510377 C9orf62Q8N4C0 152 aa13.77□□□□□ -0.2
USP38-202ENST00000510377 DGAT2Q96PD7 388 aa13.77□□□□□ -0.2
USP38-202ENST00000510377 HPF1Q9NWY4 346 aa13.77□□□□□ -0.2
USP38-202ENST00000510377 F5H5P2 479 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 SEMA7AO75326 666 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 RDH16O75452 317 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 AMY2AP04746 511 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 TFPIP10646 304 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 ZNF35P13682 527 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 MAPK3P27361 379 aaPredicted RBP13.77□□□□□ -0.21
USP38-202ENST00000510377 ERV3-1Q14264 604 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 MAPK14Q16539 360 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 INO80EQ8NBZ0 244 aaPredicted RBP13.77□□□□□ -0.21
USP38-202ENST00000510377 OR52R1Q8NGF1 315 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 OR5T3Q8NGG3 340 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 OR2A1Q8NGT9 310 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 DIO2Q92813 273 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 GAL3ST3Q96A11 431 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 PEX11GQ96HA9 241 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 SDF2Q99470 211 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 APOBEC3BQ9UH17 382 aaKnown RBP13.77□□□□□ -0.21
USP38-202ENST00000510377 CHD5Q8TDI0 1954 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 PRAMEF27A3QJZ7 478 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 ACOT7O00154 380 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 APEHP13798 732 aaKnown RBP13.77□□□□□ -0.21
USP38-202ENST00000510377 CSNK1A1LQ8N752 337 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 OR11H7Q8NGC8 314 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 RASD2Q96D21 266 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 C5orf34Q96MH7 638 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 NKX3-1Q99801 234 aaPredicted RBP13.77□□□□□ -0.21
USP38-202ENST00000510377 ULBP3Q9BZM4 244 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 OR8D2Q9GZM6 311 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 ZMAT3Q9HA38 289 aaKnown RBP13.77□□□□□ -0.21
USP38-202ENST00000510377 IL21RQ9HBE5 538 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 IL20Q9NYY1 176 aa13.77□□□□□ -0.21
USP38-202ENST00000510377 SIRT4Q9Y6E7 314 aaPredicted RBP13.77□□□□□ -0.21
USP38-202ENST00000510377 TEX51A0A1B0GUA7 166 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 DISC1C4P0D8 188 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 PTBP1P26599 531 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■■■□ 26
USP38-202ENST00000510377 SLC6A1P30531 599 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 FXYD6P3P58550 94 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 DOC2BQ14184 412 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 UBXN2BQ14CS0 331 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 TMEM31Q5JXX7 168 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 FAM69AQ5T7M9 428 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 ZNF776Q68DI1 518 aaPredicted RBP13.76□□□□□ -0.21
USP38-202ENST00000510377 TMEM91Q6ZNR0 172 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 LINC01555Q8NAE3 123 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 ZNF248Q8NDW4 579 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 TSNAXQ99598 290 aaKnown RBP13.76□□□□□ -0.21
USP38-202ENST00000510377 NRIP3Q9NQ35 241 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 MAN2C1Q9NTJ4 1040 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 TSC2P49815 1807 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 DCDC2BA2VCK2 349 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 EEF1E1-BLOC1S5C9J1V9 151 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 PRAF2O60831 178 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 NDUFS1P28331 727 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 DLX5P56178 289 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 RPE65Q16518 533 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 TMEM64Q6YI46 380 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 ZNF550Q7Z398 422 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 TMIEQ8NEW7 156 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 TOR1AIP2Q8NFQ8 470 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 OR52B4Q8NGK2 314 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 METTL21AQ8WXB1 218 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 SENP5Q96HI0 755 aaPredicted RBP13.76□□□□□ -0.21
USP38-202ENST00000510377 IFT46Q9NQC8 304 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 OR2S2Q9NQN1 319 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 ATXN7L1Q9ULK2 861 aaPredicted RBP13.76□□□□□ -0.21
USP38-202ENST00000510377 SCN2AQ99250 2005 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 SHISA3A0PJX4 238 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 PRICKLE3O43900 615 aaPredicted RBP13.76□□□□□ -0.21
USP38-202ENST00000510377 GREM1O60565 184 aa13.76□□□□□ -0.21
USP38-202ENST00000510377 RPS21P63220 83 aaKnown RBP13.76□□□□□ -0.21
USP38-202ENST00000510377 AANATQ16613 207 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms