RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, human

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-223	ENST00000508608	SNTA1	Q13424	505 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	CAMK2D	Q13557	499 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	TCEA2	Q15560	299 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	TOR2A	Q5JU69	321 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	UNQ9370/PRO34162	Q6UXP9	181 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	RD3	Q7Z3Z2	195 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	ZAR1	Q86SH2	424 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	SYT9	Q86SS6	491 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	ZNF687	Q8N1G0	1237 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	ARL14	Q8N4G2	192 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	TMEM52	Q8NDY8	209 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	SGTB	Q96EQ0	304 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	SMAD5	Q99717	465 aa	Known RBP	12	□□□□□ -0.49
CAST-223	ENST00000508608	AUNIP	Q9H7T9	357 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	HEXA-AS1	Q9H8Q6	139 aa		12	□□□□□ -0.49
CAST-223	ENST00000508608	EIF3K	Q9UBQ5	218 aa	Known RBP	12	□□□□□ -0.49
CAST-223	ENST00000508608	MRPS2	Q9Y399	296 aa	Known RBP	12	□□□□□ -0.49
CAST-223	ENST00000508608	TEX51	A0A1B0GUA7	166 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	OR6C74	A6NCV1	312 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	POM121B	A6NF01	834 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	GABARAP	H6UMI1	98 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	AIP	O00170	330 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	PPM1B	O75688	479 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	TGM6	O95932	706 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	CT62	P0C5K7	136 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	ANKRD34C	P0C6C1	535 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	C4BPB	P20851	252 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	ACAA2	P42765	397 aa	Known RBP	11.99	□□□□□ -0.49
CAST-223	ENST00000508608	TNFRSF4	P43489	277 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	DIO1	P49895	249 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	EMD	P50402	254 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	CCR9	P51686	369 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	HCCS	P53701	268 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	SEC13	P55735	322 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	MRPS10	P82664	201 aa	Known RBP	11.99	□□□□□ -0.49
CAST-223	ENST00000508608	ITPRIPL2	Q3MIP1	535 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	ELFN2	Q5R3F8	820 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	LINC00114	Q6XXX2	140 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	DPY19L2P2	Q6ZN68	376 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	ESPNL	Q6ZVH7	1005 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	CMTM4	Q8IZR5	234 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	CA13	Q8N1Q1	262 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	OR52R1	Q8NGF1	315 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.99	□□□□□ -0.49
CAST-223	ENST00000508608	LMAN2L	Q9H0V9	348 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	GLTP	Q9NZD2	209 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	NCDN	Q9UBB6	729 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	UBQLN2	Q9UHD9	624 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	IER3IP1	Q9Y5U9	82 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	LAMA3	Q16787	3333 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	TRBV23OR9-2	A0A075B6M9	112 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	ZSCAN5B	A6NJL1	495 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	SULT1B1	O43704	296 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	OR10H2	O60403	315 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	GALR3	O60755	368 aa	Predicted RBP	11.99	□□□□□ -0.49
CAST-223	ENST00000508608	CBX7	O95931	251 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	SLC35E2	P0CK97	266 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	SRM	P19623	302 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	RPL4	P36578	427 aa	Known RBP	11.99	□□□□□ -0.49
CAST-223	ENST00000508608	PPP2CB	P62714	309 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	PPP2CA	P67775	309 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	RPL6	Q02878	288 aa	Known RBP	11.99	□□□□□ -0.49
CAST-223	ENST00000508608	METTL11B	Q5VVY1	283 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	GPR139	Q6DWJ6	353 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	RNF44	Q7L0R7	432 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	PRSS41	Q7RTY9	318 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	LSR	Q86X29	649 aa	Predicted RBP	11.99	□□□□□ -0.49
CAST-223	ENST00000508608	TMEFF1	Q8IYR6	380 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.99	□□□□□ -0.49
CAST-223	ENST00000508608	BAD	Q92934	168 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	LMF2	Q9BU23	707 aa	Known RBP	11.99	□□□□□ -0.49
CAST-223	ENST00000508608	CAPN10	Q9HC96	672 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	KLHL9	Q9P2J3	617 aa		11.99	□□□□□ -0.49
CAST-223	ENST00000508608	ATG2A	Q2TAZ0	1938 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	ATG2B	Q96BY7	2078 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608		A0A1B0GUH1	482 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608		A6NCN8	305 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	C2orf74	A8MZ97	194 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	KRT33A	O76009	404 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	APBB3	O95704	486 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	PSMB1	P20618	241 aa	Known RBP	11.98	□□□□□ -0.49
CAST-223	ENST00000508608	LCN1	P31025	176 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	KIR2DL1	P43626	348 aa	Predicted RBP	11.98	□□□□□ -0.49
CAST-223	ENST00000508608	PSMD4	P55036	377 aa	Known RBP	11.98	□□□□□ -0.49
CAST-223	ENST00000508608	RAB38	P57729	211 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	GPR18	Q14330	331 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	ISX	Q2M1V0	245 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	CLLU1	Q5K131	121 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	PRSS45	Q7RTY3	260 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	BEST4	Q8NFU0	473 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	OR5T3	Q8NGG3	340 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	C15orf40	Q8WUR7	153 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	FAM3C	Q92520	227 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	ARSG	Q96EG1	525 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	HSPA12B	Q96MM6	686 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	NOX4	Q9NPH5	578 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	RCE1	Q9Y256	329 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	ZNF281	Q9Y2X9	895 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	IFITM5	A6NNB3	132 aa		11.98	□□□□□ -0.49
CAST-223	ENST00000508608	MCIDAS	D6RGH6	385 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms