RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 A0A1W2PNR3 127 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 A0A1W2PNV4 684 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 TMEM72A0PK05 275 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 HTR3EA5X5Y0 456 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 FAM90A27PA6NNH2 459 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 TMEM229AB2RXF0 380 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 EEF1E1-BLOC1S5C9J1V9 151 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 PRSS44E7EML9 344 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 GPR171O14626 319 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 MSTNO14793 375 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 GYG2O15488 501 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 EEF1E1O43324 174 aaKnown RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 EFNA2O43921 213 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 SS18L1O75177 396 aaPredicted RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 UBOX5O94941 541 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 VAMP5O95183 116 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 OR5F1O95221 314 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 TGM6O95932 706 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 TCN1P20061 433 aaPredicted RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 SHC1P29353 583 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 CPOXP36551 454 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 RBM34P42696 430 aaKnown RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 ASCL1P50553 236 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 OR2B6P58173 313 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 HOXC5Q00444 222 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 ST3GAL3Q11203 375 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 PDK3Q15120 406 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 NPTX1Q15818 432 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 FXNQ16595 210 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 ENTPD8Q5MY95 495 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 FAM69AQ5T7M9 428 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 C1orf140Q5VVS0 124 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 PAQR6Q6TCH4 344 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 DEF8Q6ZN54 512 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 NCCRP1Q6ZVX7 275 aaPredicted RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 KIF18BQ86Y91 864 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 CCDC71Q8IV32 467 aaPredicted RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 CNEP1R1Q8N9A8 125 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 OR6K3Q8NGY3 331 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 OR6S1Q8NH40 331 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 MFSD8Q8NHS3 518 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 HS6ST2Q96MM7 605 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 PSMG3-AS1Q96PY0 264 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 KLHL4Q9C0H6 718 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 DCAF13Q9NV06 445 aaKnown RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 C6orf203Q9P0P8 240 aaPredicted RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 KLHL13Q9P2N7 655 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 CD300AQ9UGN4 299 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 EGFL7Q9UHF1 273 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 USP22Q9UPT9 525 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 FAM32AQ9Y421 112 aaKnown RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 CORINQ9Y5Q5 1042 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 MED12LQ86YW9 2145 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 ICE1Q9Y2F5 2266 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 LIPT2A6NK58 231 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 CPSF4LA6NMK7 179 aaKnown RBP8.17□□□□□ -1.1
NUP54-207ENST00000508583 ZNF724A8MTY0 619 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 CYTIPO60759 359 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 NPIPB7O75200 414 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 AQP8O94778 261 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 TOXO94900 526 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 MT-ATP6P00846 226 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 YES1P07947 543 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 CD8BP10966 210 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 PCYT1AP49585 367 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 AGFG1P52594 562 aaKnown RBP8.17□□□□□ -1.1
NUP54-207ENST00000508583 CRYBA2P53672 197 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 CDH12P55289 794 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 RASGEF1BQ0VAM2 473 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 OR7A5Q15622 319 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 FBXL19-AS1Q494R0 122 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 TTC33Q6PID6 262 aaPredicted RBP8.17□□□□□ -1.1
NUP54-207ENST00000508583 COMTD1Q86VU5 262 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 GCNT2Q8N0V5 402 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 RNF148Q8N7C7 305 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 ZNF524Q96C55 264 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 ASB9Q96DX5 294 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 SLC41A3Q96GZ6 507 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 HSH2DQ96JZ2 352 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 ARL5BQ96KC2 179 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 PRRC1Q96M27 445 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 LRGUKQ96M69 825 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 SF3B5Q9BWJ5 86 aaKnown RBP8.17□□□□□ -1.1
NUP54-207ENST00000508583 SRXN1Q9BYN0 137 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 OR11A1Q9GZK7 315 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 MMADHCQ9H3L0 296 aaPredicted RBP8.17□□□□□ -1.1
NUP54-207ENST00000508583 BCO1Q9HAY6 547 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 KRCC1Q9NPI7 259 aaPredicted RBP8.17□□□□□ -1.1
NUP54-207ENST00000508583 TAS2R1Q9NYW7 299 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 ACTR3BQ9P1U1 418 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 PLEKHB1Q9UF11 243 aaPredicted RBP8.17□□□□□ -1.1
NUP54-207ENST00000508583 PROCRQ9UNN8 238 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 B3GALT5Q9Y2C3 310 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 MPDZO75970 2070 aa8.17□□□□□ -1.1
NUP54-207ENST00000508583 IGKV3D-15A0A087WSY6 115 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 A1L4Q6 167 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 ARPC2O15144 300 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 TNFSF13O75888 250 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 SMNDC1O75940 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
NUP54-207ENST00000508583 CNOT4O95628 575 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms