RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 GKN3PP0CG01 181 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 IL7RP16871 459 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 HOXB9P17482 250 aaPredicted RBP14.29□□□□□ -0.12
LMNA-222ENST00000508500 SLC1A3P43003 542 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 POLR2HP52434 150 aaKnown RBP14.29□□□□□ -0.12
LMNA-222ENST00000508500 OR2B6P58173 313 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 TXNL4AP83876 142 aaKnown RBP14.29□□□□□ -0.12
LMNA-222ENST00000508500 PPA1Q15181 289 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 STK11Q15831 433 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 GSTA3Q16772 222 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 ZNF672Q499Z4 452 aaPredicted RBP14.29□□□□□ -0.12
LMNA-222ENST00000508500 RPS26P11Q5JNZ5 115 aaPredicted RBP14.29□□□□□ -0.12
LMNA-222ENST00000508500 CGB2Q6NT52 195 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 SLC38A5Q8WUX1 472 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 ZBTB18Q99592 522 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 BDH2Q9BUT1 245 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 TRIM2Q9C040 744 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 TPT1P8Q9HAU6 139 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 NOSIPQ9Y314 301 aaKnown RBP14.29□□□□□ -0.12
LMNA-222ENST00000508500 MAGED1Q9Y5V3 778 aaPredicted RBP14.29□□□□□ -0.12
LMNA-222ENST00000508500 HIVEP2P31629 2446 aa14.29□□□□□ -0.12
LMNA-222ENST00000508500 CFAP73A6NFT4 308 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 OR5H1A6NKK0 313 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 TMCC2O75069 709 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 RAD51DO75771 328 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 CD8AP01732 235 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 BCHEP06276 602 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 THBS1P07996 1170 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 NUDT7P0C024 238 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 PRG2P13727 222 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 GGT1P19440 569 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 FKBP2P26885 142 aaKnown RBP14.28□□□□□ -0.12
LMNA-222ENST00000508500 HTR3AP46098 478 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 ANXA11P50995 505 aaKnown RBP14.28□□□□□ -0.12
LMNA-222ENST00000508500 POLR2JP52435 117 aaKnown RBP14.28□□□□□ -0.12
LMNA-222ENST00000508500 CHD3Q12873 2000 aaKnown RBP14.28□□□□□ -0.12
LMNA-222ENST00000508500 TIMM23BQ5SRD1 257 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 EPGNQ6UW88 154 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 CLIP4Q8N3C7 705 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 OR52E4Q8NGH9 312 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 OR52P1PQ8NH57 321 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 PIGXQ8TBF5 258 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 SMAP2Q8WU79 429 aaPredicted RBP14.28□□□□□ -0.12
LMNA-222ENST00000508500 GTF2H4Q92759 462 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 PMM1Q92871 262 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 FBXW5Q969U6 566 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 APH1AQ96BI3 265 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 USB1Q9BQ65 265 aaKnown RBP14.28□□□□□ -0.12
LMNA-222ENST00000508500 PAIP1Q9H074 479 aaKnown RBP14.28□□□□□ -0.12
LMNA-222ENST00000508500 CXorf56Q9H5V9 222 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 NGBQ9NPG2 151 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 EMC3Q9P0I2 261 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 FLVCR1Q9Y5Y0 555 aa14.28□□□□□ -0.12
LMNA-222ENST00000508500 SONP18583 2426 aaKnown RBP14.27□□□□□ -0.12
LMNA-222ENST00000508500 A0A1W2PR80 420 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 KIAA1324LA8MWY0 1029 aaPredicted RBP14.27□□□□□ -0.13
LMNA-222ENST00000508500 PDLIM1O00151 329 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 UBDO15205 165 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 NDUFS7O75251 213 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 DCTN3O75935 186 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 ITGA5P08648 1049 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 CDKN1AP38936 164 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 CRATP43155 626 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 ARFIP2P53365 341 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 ATP5J2P56134 94 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 DSTNP60981 165 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 RPS4XP62701 263 aaKnown RBP14.27□□□□□ -0.13
LMNA-222ENST00000508500 SLC17A1Q14916 467 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 GABRA6Q16445 453 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 SLC2A7Q6PXP3 512 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 MSANTD1Q6ZTZ1 278 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 FUNDC1Q8IVP5 155 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 ZIC4Q8N9L1 334 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 C10orf82Q8WW14 230 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 ZHX1-C8orf76Q96EF9 292 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 TMEM19Q96HH6 336 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 MDFIQ99750 246 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 P2RX2Q9UBL9 471 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 MALT1Q9UDY8 824 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 PCDHB14Q9Y5E9 798 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 SLC25A15Q9Y619 301 aa14.27□□□□□ -0.13
LMNA-222ENST00000508500 GPR171O14626 319 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 MRPL33O75394 65 aaKnown RBP14.26□□□□□ -0.13
LMNA-222ENST00000508500 PTNP21246 168 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 MAGEA8P43361 318 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 SLC35A1P78382 337 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 KRTAP1-1Q07627 177 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 SPOCK1Q08629 439 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 FAPQ12884 760 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 BNIP2Q12982 314 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 TNK1Q13470 666 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 ZSCAN26Q16670 478 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 P2RY8Q86VZ1 359 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 PEX5LQ8IYB4 626 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 UBE2J2Q8N2K1 259 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 C10orf111Q8N326 155 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 TMEM99Q8N816 258 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 OR52N5Q8NH56 324 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 DDIT4LQ96D03 193 aa14.26□□□□□ -0.13
LMNA-222ENST00000508500 ITCHQ96J02 903 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms