RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 PDP1Q9P0J1 537 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-206ENST00000507875 CIDEBQ9UHD4 219 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 PHF11Q9UIL8 331 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 DTX4Q9Y2E6 619 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 LIPGQ9Y5X9 500 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 SLC22A7Q9Y694 548 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 NUP210LQ5VU65 1888 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 A0A096LPI6 279 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 FUOMA2VDF0 154 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 WRBO00258 174 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 ARHGEF9O43307 516 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 ANKRD34CP0C6C1 535 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 ITPKBP27987 946 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 RPL5P46777 297 aaKnown RBP6.51□□□□□ -1.37
CLCN3-206ENST00000507875 SLC9A3P48764 834 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 MAZP56270 477 aaKnown RBP6.51□□□□□ -1.37
CLCN3-206ENST00000507875 BIKQ13323 160 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 SPCS2Q15005 226 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 HKDC1Q2TB90 917 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 DEFB133Q30KQ1 61 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 CCNYL2Q5T2Q4 361 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 FBXO42Q6P3S6 717 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 GPR135Q8IZ08 494 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 TMEM132CQ8N3T6 1108 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 CBR4Q8N4T8 237 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 C2orf73Q8N5S3 287 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-206ENST00000507875 C16orf78Q8WTQ4 265 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 ADIPOR1Q96A54 375 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 MS4A6EQ96DS6 147 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 NSMCE2Q96MF7 247 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 ZNF583Q96ND8 569 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 ANKRD60Q9BZ19 345 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 BCL2L14Q9BZR8 327 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 LYRM4Q9HD34 91 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 TMEM9BQ9NQ34 198 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 TMEM74BQ9NUR3 256 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 FAM30AQ9NZY2 134 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 STEAP1Q9UHE8 339 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 RPH3ALQ9UNE2 315 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 B3GNT3Q9Y2A9 372 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 RNF215Q9Y6U7 377 aa6.51□□□□□ -1.37
CLCN3-206ENST00000507875 IGHV1OR21-1A0A087WYE8 117 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 A0A0A6YYD5 115 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 GNG14A0A1W2PPG7 69 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 RNASET2O00584 256 aaKnown RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 PLPP1O14494 284 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ACOX3O15254 700 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 LRRTM2O43300 516 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 LCMT2O60294 686 aaKnown RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 PFDN1O60925 122 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ZBTB11O95625 1053 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 MBPP02686 304 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 TFAP2AP05549 437 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 GGT1P19440 569 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 IFNA8P32881 189 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 RPS5P46782 204 aaKnown RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 BCAP31P51572 246 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 PMS2P3Q13401 168 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ZNF273Q14593 569 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ATP6AP1Q15904 470 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 GAGE13Q4V321 117 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 CPTPQ5TA50 214 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 RIPPLY2Q5TAB7 128 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 FAM122CQ6P4D5 195 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 GLDNQ6ZMI3 551 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 SATL1Q86VE3 508 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 CATSPERDQ86XM0 798 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ZNF573Q86YE8 665 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 PRSS58Q8IYP2 241 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 DNAJC22Q8N4W6 341 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 OR7G1Q8NGA0 311 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 PATE1Q8WXA2 126 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 CCDC115Q96NT0 180 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 OR52E6Q96RD3 313 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 CPPED1Q9BRF8 314 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 CHID1Q9BWS9 393 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 MRPS26Q9BYN8 205 aaKnown RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 VCX2Q9H322 139 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 GAREM1Q9H706 876 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 HIF1ANQ9NWT6 349 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 SLC25A37Q9NYZ2 338 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 NDUFA13Q9P0J0 144 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 OAZ3Q9UMX2 235 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ENTPD4Q9Y227 616 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 PI4KAP42356 2102 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 SPTBN4Q9H254 2564 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 CACNA1EQ15878 2313 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 PRAMEF33A0A0G2JMD5 474 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 SMIM31A0A1B0GVY4 71 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 FEZF1A0PJY2 475 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 LNP1A1A4G5 178 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 C1orf226A1L170 272 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ANKRD61A6NGH8 418 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 A6NL46 340 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 DLGAP1O14490 977 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 FLRT2O43155 660 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 LANCL1O43813 399 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ETHE1O95571 254 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 GP1BAP07359 652 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms