RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FARSBQ9NSD9 589 aaKnown RBP6.11□□□□□ -1.43
VCAN-207ENST00000507162 DECR2Q9NUI1 292 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 GIN1Q9NXP7 522 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 SLC9A8Q9Y2E8 581 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 REXO2Q9Y3B8 237 aaKnown RBP6.11□□□□□ -1.43
VCAN-207ENST00000507162 INSIG2Q9Y5U4 225 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 ACTL7BQ9Y614 415 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 CACNG2Q9Y698 323 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
VCAN-207ENST00000507162 ARPC4-TTLL3A0A0A6YYG9 625 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 LCE6AA0A183 80 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 AGAP5A6NIR3 686 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 TTC36A6NLP5 189 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 H3BNH8 94 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 CYP7B1O75881 506 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 PIAS1O75925 651 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 ZNF432O94892 652 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 KCNK2O95069 426 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 SFTPBP07988 381 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 PRPS2P11908 318 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 GFAPP14136 432 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 ZNF12P17014 697 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 LORP23490 312 aaPredicted RBP6.1□□□□□ -1.43
VCAN-207ENST00000507162 CRYBB2P43320 205 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 CAPZA2P47755 286 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 CCNG1P51959 295 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 SLC16A1P53985 500 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 TAGLNQ01995 201 aaKnown RBP6.1□□□□□ -1.43
VCAN-207ENST00000507162 HFEQ30201 348 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 VPS26BQ4G0F5 336 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 SYT14P1Q58G82 188 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 CASC10Q5T4H9 136 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 FAM205BPQ63HN1 556 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 PAQR6Q6TCH4 344 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 Q6ZTK2 550 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 USP51Q70EK9 711 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 ISCA2Q86U28 154 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 PPIL6Q8IXY8 311 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 C1orf174Q8IYL3 243 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 OR2L13Q8N349 312 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 ZNF614Q8N883 585 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 POMGNT2Q8NAT1 580 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 IL17RDQ8NFM7 739 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 CDC26Q8NHZ8 85 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 MAIP1Q8WWC4 291 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 CCL17Q92583 94 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 TRIM44Q96DX7 344 aaPredicted RBP6.1□□□□□ -1.43
VCAN-207ENST00000507162 ELP4Q96EB1 424 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 TSPAN17Q96FV3 270 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 OTUB1Q96FW1 271 aaPredicted RBP6.1□□□□□ -1.43
VCAN-207ENST00000507162 CHMP6Q96FZ7 201 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 TBX15Q96SF7 602 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 ELOVL6Q9H5J4 265 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 ZNF385DQ9H6B1 395 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 TAAR3PQ9P1P4 343 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 ZNF346Q9UL40 294 aaKnown RBP6.1□□□□□ -1.43
VCAN-207ENST00000507162 CHMP2BQ9UQN3 213 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 FLVCR1Q9Y5Y0 555 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 U3KQK5 164 aa6.1□□□□□ -1.43
VCAN-207ENST00000507162 HERC2O95714 4834 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 TRAV40A0A0B4J280 105 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 A0A1W2PQD3 144 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 ZNF587BE7ETH6 402 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 TRAF3IP2O43734 574 aaPredicted RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 GPR137BO60478 399 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 NKX2-2O95096 273 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 WISP3O95389 354 aaPredicted RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 PDYNP01213 254 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 IGKV3-15P01624 115 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 IGHMP01871 453 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 SBK2P0C263 348 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 STMN1P16949 149 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 CCNA2P20248 432 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 FUT4P22083 530 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 MAPK1P28482 360 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 CD80P33681 288 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 ELK3P41970 407 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 SUMO3P55854 103 aaPredicted RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 SESN3P58005 492 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 EGR3Q06889 387 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 MGAT5Q09328 741 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 CDK5R2Q13319 367 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 HEPACAMQ14CZ8 416 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 TSTQ16762 297 aaKnown RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 PRSS53Q2L4Q9 553 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 SLC25A53Q5H9E4 307 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 Q6ZSV7 163 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 RAPH1Q70E73 1250 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 SZRD1Q7Z422 152 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 MTERF4Q7Z6M4 381 aaKnown RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 ZBED8Q8IZ13 594 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 LYG1Q8N1E2 194 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 BHLHE22Q8NFJ8 381 aaPredicted RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 OR5W2Q8NH69 310 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 TBC1D15Q8TC07 691 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 C16orf78Q8WTQ4 265 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 SELENOMQ8WWX9 145 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 DYRK2Q92630 601 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 MAGOHBQ96A72 148 aaKnown RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 C16orf58Q96GQ5 468 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms