RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CDH12P55289 794 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 OR2B6P58173 313 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 SELENOWP63302 87 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 FXNQ16595 210 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 ELOA3BQ3SY89 546 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 C1orf140Q5VVS0 124 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 ABLIM2Q6H8Q1 611 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 FAM214BQ7L5A3 538 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 VTCN1Q7Z7D3 282 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 ACBD4Q8NC06 268 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 ELOA3Q8NG57 546 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 TPD52L3Q96J77 140 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 NDE1Q9NXR1 346 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 SLC9A8Q9Y2E8 581 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 LIPT2A6NK58 231 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 CYTIPO60759 359 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 RAMP1O60894 148 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 UBOX5O94941 541 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 PLGP00747 810 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-210ENST00000506941 SERPINA1P01009 418 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 PNMTP11086 282 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 IGFBP2P18065 325 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 PTNP21246 168 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 AGTR1P30556 359 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 IDUAP35475 653 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 MSX2P35548 267 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-210ENST00000506941 H3F3AP84243 136 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 CEACAM7Q14002 265 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 RNPS1Q15287 305 aaKnown RBP16.2■□□□□ 0.18
NPHP4-210ENST00000506941 FBXL19-AS1Q494R0 122 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 SAMD4BQ5PRF9 694 aaKnown RBP16.2■□□□□ 0.18
NPHP4-210ENST00000506941 SP5Q6BEB4 398 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-210ENST00000506941 ZNF613Q6PF04 617 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 CBLL1Q75N03 491 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 LUZP2Q86TE4 346 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 P3H2Q8IVL5 708 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 STK35Q8TDR2 534 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 ADAMTS16Q8TE57 1224 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 SLC47A1Q96FL8 570 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 PSD2Q9BQI7 771 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 PTDSS2Q9BVG9 487 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 CHST11Q9NPF2 352 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 GLRX2Q9NS18 164 aa16.2■□□□□ 0.18
NPHP4-210ENST00000506941 ANKHD1Q8IWZ3 2542 aaKnown RBP16.2■□□□□ 0.18
NPHP4-210ENST00000506941 HRNRQ86YZ3 2850 aaPredicted RBP16.19■□□□□ 0.18
NPHP4-210ENST00000506941 A0A087WUJ7 227 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 DNPH1O43598 174 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 PRKD3O94806 890 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 ZNF682O95780 498 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 FPR1P21462 350 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 SLC35A1P78382 337 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 RASGEF1BQ0VAM2 473 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 OR7A5Q15622 319 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 SWT1Q5T5J6 900 aaKnown RBP16.19■□□□□ 0.18
NPHP4-210ENST00000506941 ZNF787Q6DD87 383 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 LINC00114Q6XXX2 140 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 WDR88Q6ZMY6 472 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 DEF8Q6ZN54 512 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 CCDC103Q8IW40 242 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 MCEMP1Q8IX19 187 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 TUSC5Q8IXB3 177 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 SLC43A2Q8N370 569 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 RNF217Q8TC41 542 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 FAM162AQ96A26 154 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 KTI12Q96EK9 354 aaPredicted RBP16.19■□□□□ 0.18
NPHP4-210ENST00000506941 OPN3Q9H1Y3 402 aaPredicted RBP16.19■□□□□ 0.18
NPHP4-210ENST00000506941 PIGMQ9H3S5 423 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 ADPRHL2Q9NX46 363 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 KLHL13Q9P2N7 655 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 EMC9Q9Y3B6 208 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 ITPR2Q14571 2701 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 CACNA1DQ01668 2161 aa16.19■□□□□ 0.18
NPHP4-210ENST00000506941 TACC2O95359 2948 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 FBN2P35556 2912 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 TRAPPC13A5PLN9 417 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 ZNF716A6NP11 495 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 FTCDNL1E5RQL4 147 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 CHP2O43745 196 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 SMNDC1O75940 238 aaKnown RBP eCLIP16.18■□□□□ 0.18
NPHP4-210ENST00000506941 GPIP06744 558 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 RPS5P46782 204 aaKnown RBP16.18■□□□□ 0.18
NPHP4-210ENST00000506941 CTBP2P56545 445 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 EEF1A1P5Q5VTE0 462 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 GTF2IRD2BQ6EKJ0 949 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 GLYATQ6IB77 296 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 NUFIP2Q7Z417 695 aaKnown RBP16.18■□□□□ 0.18
NPHP4-210ENST00000506941 GTF2IRD2Q86UP8 949 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 OR6K3Q8NGY3 331 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 LZICQ8WZA0 190 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 TAAR8Q969N4 342 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 ZHX1-C8orf76Q96EF9 292 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 HSH2DQ96JZ2 352 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 ZNF300Q96RE9 604 aaPredicted RBP16.18■□□□□ 0.18
NPHP4-210ENST00000506941 ENKD1Q9H0I2 346 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 BCO1Q9HAY6 547 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 SELENONQ9NZV5 590 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 KLHL9Q9P2J3 617 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 SLC7A7Q9UM01 511 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 SNX13Q9Y5W8 968 aa16.18■□□□□ 0.18
NPHP4-210ENST00000506941 A8MXE2 369 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms