RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PNPLA3Q9NST1 481 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 PARPBPQ9NWS1 579 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 ALKBH4Q9NXW9 302 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 OSGIN2Q9Y236 505 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 SLC6A5Q9Y345 797 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 SH3GLB1Q9Y371 365 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 EMC9Q9Y3B6 208 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 LIPGQ9Y5X9 500 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 PTPN13Q12923 2485 aa7.6□□□□□ -1.19
PDGFC-205ENST00000506880 LIPT2A6NK58 231 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 CLDN24A6NM45 220 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 CLCA1A8K7I4 914 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 EIF1AYO14602 144 aaKnown RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ACOT8O14734 319 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 MSTNO14793 375 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 OIP5O43482 229 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 TPST1O60507 370 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 CYTIPO60759 359 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 SS18L1O75177 396 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 CIB2O75838 187 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 PRKD3O94806 890 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 SEMG1P04279 462 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 FABP3P05413 133 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 CD8BP10966 210 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 GNLYP22749 145 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 GTF2E2P29084 291 aaKnown RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 RYKP34925 604 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 DIO1P49895 249 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 CTBP2P56545 445 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 CLDN15P56746 228 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 SORDQ00796 357 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ZP4Q12836 540 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 GUSBP1Q15486 140 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 TOMM34Q15785 309 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 TMEM176BQ3YBM2 270 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 C1orf140Q5VVS0 124 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ABLIM2Q6H8Q1 611 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 RPL13AP3Q6NVV1 102 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ZFP1Q6P2D0 407 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF585AQ6P3V2 769 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 RINLQ6ZS11 566 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 RRM2BQ7LG56 351 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 P4HA3Q7Z4N8 544 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ABHD12BQ7Z5M8 362 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 STK32CQ86UX6 486 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 MCEMP1Q8IX19 187 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 CDK20Q8IZL9 346 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 CADM2Q8N3J6 435 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 SMYD1Q8NB12 490 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 PAPD5Q8NDF8 572 aaKnown RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 OR6K3Q8NGY3 331 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 LILRB4Q8NHJ6 448 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 PRR7Q8TB68 274 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 FNDC8Q8TC99 324 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 SSC4DQ8WTU2 575 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ACOT11Q8WXI4 607 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 OSTF1Q92882 214 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 TMEM45BQ96B21 275 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 NRBF2Q96F24 287 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 SLC41A3Q96GZ6 507 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 HSH2DQ96JZ2 352 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 C7orf34Q96L11 122 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF300Q96RE9 604 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 TUBA1CQ9BQE3 449 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 FNDC11Q9BVV2 318 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 TSPAN10Q9H1Z9 355 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 COQ10BQ9H8M1 238 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 MRPL39Q9NYK5 338 aaKnown RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ELOVL5Q9NYP7 299 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 RIMS3Q9UJD0 308 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF229Q9UJW7 825 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 RCE1Q9Y256 329 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 RPH3AQ9Y2J0 694 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-205ENST00000506880 FAM215AQ9Y5M1 114 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 DOPEY2Q9Y3R5 2298 aa7.59□□□□□ -1.19
PDGFC-205ENST00000506880 GCN1Q92616 2671 aaKnown RBP7.58□□□□□ -1.2
PDGFC-205ENST00000506880 A0A0J9YW62 118 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 A0A1W2PNV4 684 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 TCRBV3S1A0A5B6 114 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 AQP7P3A6NL99 342 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 LRRTM2O43300 516 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 FRS3O43559 492 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 AHCYL1O43865 530 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 ADAM11O75078 769 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 ZNF682O95780 498 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 LDLRP01130 860 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 MT-ND1P03886 318 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 H1F0P07305 194 aaKnown RBP7.58□□□□□ -1.2
PDGFC-205ENST00000506880 GKN3PP0CG01 181 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 GLI4P10075 376 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 PPP3CBP16298 524 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 HTR2AP28223 471 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 EIF1AXP47813 144 aaKnown RBP7.58□□□□□ -1.2
PDGFC-205ENST00000506880 CDH12P55289 794 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 PRPS1P60891 318 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 MYBPHQ13203 477 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 MRPL49Q13405 166 aaKnown RBP7.58□□□□□ -1.2
PDGFC-205ENST00000506880 FLOT2Q14254 428 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 FAM205BPQ63HN1 556 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms