RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 IFNA8P32881 189 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 IDUAP35475 653 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 RBM34P42696 430 aaKnown RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 AGFG1P52594 562 aaKnown RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 CSNK2A1P68400 391 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 H3F3AP84243 136 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 CHRNB3Q05901 458 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 TRAM2Q15035 370 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 PON3Q15166 354 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 ZNF239Q16600 458 aaKnown RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 FAM98BQ52LJ0 330 aaKnown RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 TMEM211Q6ICI0 200 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 TTC33Q6PID6 262 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 PLXDC2Q6UX71 529 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 CYP4Z1Q86W10 505 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 SPATA24Q86W54 205 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 PAPD5Q8NDF8 572 aaKnown RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 OR6S1Q8NH40 331 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 MFSD8Q8NHS3 518 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 RNF217Q8TC41 542 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 CANT1Q8WVQ1 401 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 TAAR8Q969N4 342 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 HS6ST2Q96MM7 605 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 ZNF347Q96SE7 839 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 PIP5K1AQ99755 562 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 FNDC11Q9BVV2 318 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 SLC19A3Q9BZV2 496 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 ANKRD19PQ9H560 264 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 NMNAT1Q9HAN9 279 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 FAM32AQ9Y421 112 aaKnown RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 SETXQ7Z333 2677 aaKnown RBP11.5□□□□□ -0.57
TCOF1-210ENST00000506767 MPDZO75970 2070 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 TRAV36DV7A0A075B6V5 113 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 A0A1W2PRQ8 180 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 SLC22A20A6NK97 555 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 OR2T1O43869 369 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 CIB2O75838 187 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 AQP8O94778 261 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 RCBTB2O95199 551 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 IGF2P01344 180 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 NQO1P15559 274 aaKnown RBP11.49□□□□□ -0.57
TCOF1-210ENST00000506767 RPS5P46782 204 aaKnown RBP11.49□□□□□ -0.57
TCOF1-210ENST00000506767 NUP107P57740 925 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 SLC35A1P78382 337 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 LTBQ06643 244 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 PMPCAQ10713 525 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 CCNIQ14094 377 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 DGCR6Q14129 220 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 FAM69AQ5T7M9 428 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 RIPPLY2Q5TAB7 128 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 C1orf146Q5VVC0 180 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 NCCRP1Q6ZVX7 275 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-210ENST00000506767 FJX1Q86VR8 437 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 P3H2Q8IVL5 708 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 C9orf106Q8NAJ2 232 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 FNDC9Q8TBE3 224 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 TMEM255BQ8WV15 326 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 TMEM239Q8WW34 195 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 SLCO4A1Q96BD0 722 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 DNAJA3Q96EY1 480 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 DUS3LQ96G46 650 aaKnown RBP11.49□□□□□ -0.57
TCOF1-210ENST00000506767 EPYCQ99645 322 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 FUZQ9BT04 418 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 RNF122Q9H9V4 155 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 MEPEQ9NQ76 525 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-210ENST00000506767 CCM2LQ9NUG4 571 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-210ENST00000506767 ERRFI1Q9UJM3 462 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-210ENST00000506767 MCTS1Q9ULC4 181 aaKnown RBP11.49□□□□□ -0.57
TCOF1-210ENST00000506767 SLC5A6Q9Y289 635 aa11.49□□□□□ -0.57
TCOF1-210ENST00000506767 MYO18BQ8IUG5 2567 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 CLEC18AA5D8T8 446 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 CYSRT1A8MQ03 144 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 SMAD9O15198 467 aaKnown RBP11.48□□□□□ -0.57
TCOF1-210ENST00000506767 AHSA1O95433 338 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 SYNGR4O95473 234 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 BGLAPP02818 100 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 MT-ND1P03886 318 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 H1F0P07305 194 aaKnown RBP11.48□□□□□ -0.57
TCOF1-210ENST00000506767 PTNP21246 168 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 FPR1P21462 350 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 ENPP1P22413 925 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 HMGA2P52926 109 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 UGT2B15P54855 530 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 OR2B6P58173 313 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 ACTR3P61158 418 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 ADORA2A-AS1P86434 159 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 SRSF1Q07955 248 aaKnown RBP eCLIP11.48□□□□□ -0.57
TCOF1-210ENST00000506767 OR7A5Q15622 319 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 MTFR2Q6P444 385 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 CLEC18BQ6UXF7 455 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 RNF113BQ8IZP6 322 aaKnown RBP11.48□□□□□ -0.57
TCOF1-210ENST00000506767 CLEC18CQ8NCF0 446 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 SLC7A13Q8TCU3 470 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 RNF128Q8TEB7 428 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 ACOT11Q8WXI4 607 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-210ENST00000506767 ROBO4Q8WZ75 1007 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 CCDC120Q96HB5 630 aa11.48□□□□□ -0.57
TCOF1-210ENST00000506767 RAB3IPQ96QF0 476 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-210ENST00000506767 TM9SF2Q99805 663 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms