RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HMGB1P1B2RPK0 211 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 PDLIM1O00151 329 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 EIF1BO60739 113 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 SMPD2O60906 423 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 TMCC2O75069 709 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 NPIPB7O75200 414 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 LYZL6O75951 148 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 PGM3O95394 542 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 ARAFP10398 606 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 PRG2P13727 222 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 UQCRBP14927 111 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 ETS2P15036 469 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 CCNA2P20248 432 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 OR2B6P58173 313 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 SLC35A1P78382 337 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 SLC17A1Q14916 467 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 LARS2Q15031 903 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 PAGE3Q5JUK9 113 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 FBXW9Q5XUX1 488 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 WBP2NLQ6ICG8 309 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 PAQR6Q6TCH4 344 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 PRSS57Q6UWY2 283 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 HDXQ7Z353 690 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 ATG4DQ86TL0 474 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF100Q8IYN0 542 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 C10orf111Q8N326 155 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF433Q8N7K0 673 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 GOLGA6L1Q8N7Z2 621 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 LILRB1Q8NHL6 650 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 BBS10Q8TAM1 723 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 CKAP2Q8WWK9 683 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 MAL2Q969L2 176 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 MAGEB18Q96M61 343 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 GSX2Q9BZM3 304 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF385DQ9H6B1 395 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 NGBQ9NPG2 151 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 INTS9Q9NV88 658 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 CCDC167Q9P0B6 97 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 VAPAQ9P0L0 249 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 SLAMF8Q9P0V8 285 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 MALT1Q9UDY8 824 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 NOSIPQ9Y314 301 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 IFT52Q9Y366 437 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 FLVCR1Q9Y5Y0 555 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 NSD1Q96L73 2696 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 PLCE1Q9P212 2302 aa8.01□□□□□ -1.13
PDLIM5-209ENST00000506632 TMEM247A6NEH6 219 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 DPRXA6NFQ7 191 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 OR5H1A6NKK0 313 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 TMEM229AB2RXF0 380 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 NR5A2O00482 541 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 ARHGEF9O43307 516 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 FZD7O75084 574 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 SASH3O75995 380 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 GPX2P18283 190 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 PPIBP23284 216 aaKnown RBP8□□□□□ -1.13
PDLIM5-209ENST00000506632 IDUAP35475 653 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 P2RY4P51582 365 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 SQLEQ14534 574 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 Q5PR19 223 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 TIMM23BQ5SRD1 257 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 DLEU7Q6UYE1 221 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 SSX8Q7RTT4 187 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 SERPINA11Q86U17 422 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 P2RY8Q86VZ1 359 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 ZIC4Q8N9L1 334 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 TMEM45BQ96B21 275 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 APH1AQ96BI3 265 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 C3orf49Q96BT1 292 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 C18orf12Q96KH6 178 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 NAA11Q9BSU3 229 aaPredicted RBP8□□□□□ -1.13
PDLIM5-209ENST00000506632 AMBRA1Q9C0C7 1298 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 IKZF5Q9H5V7 419 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 PIF1Q9H611 641 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 ARMC7Q9H6L4 198 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 ESRP2Q9H6T0 727 aaKnown RBP8□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF701Q9NV72 531 aaPredicted RBP8□□□□□ -1.13
PDLIM5-209ENST00000506632 NPAP1Q9NZP6 1156 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF232Q9UNY5 417 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 SLC9A8Q9Y2E8 581 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 RNF115Q9Y4L5 304 aa8□□□□□ -1.13
PDLIM5-209ENST00000506632 TLN2Q9Y4G6 2542 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 A0A1W2PP18 115 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 AQP7P3A6NL99 342 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 A8MVM7 634 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 OVOL3O00110 214 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 FRS3O43559 492 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 EDF1O60869 148 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 MRPL33O75394 65 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 IGHV3-9P01782 118 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 GPIP06744 558 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 CD3EP07766 207 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 ITGA5P08648 1049 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 DANCRP0C864 163 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 GGT1P19440 569 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 CXCR1P25024 350 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 ADSLP30566 484 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 PRKAR1BP31321 381 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 PTH2RP49190 550 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms