RNA–Protein interactions for RNA: ENST00000504174.5

SSBP2-203, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-203ENST00000504174 SLC1A3P43003 542 aa20.16■□□□□ 0.82
SSBP2-203ENST00000504174 RPL14P50914 215 aaKnown RBP20.16■□□□□ 0.82
SSBP2-203ENST00000504174 PRPS1P60891 318 aa20.16■□□□□ 0.82
SSBP2-203ENST00000504174 SLC17A1Q14916 467 aa20.16■□□□□ 0.82
SSBP2-203ENST00000504174 SPANXN4Q5MJ08 99 aa20.16■□□□□ 0.82
SSBP2-203ENST00000504174 CYB5R2Q6BCY4 276 aa20.16■□□□□ 0.82
SSBP2-203ENST00000504174 LRRC34Q8IZ02 419 aa20.16■□□□□ 0.82
SSBP2-203ENST00000504174 PROX1Q92786 737 aa20.16■□□□□ 0.82
SSBP2-203ENST00000504174 BTNL2Q9UIR0 455 aa20.16■□□□□ 0.82
SSBP2-203ENST00000504174 AGAP5A6NIR3 686 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 E9PBE3 544 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 AP3D1O14617 1153 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 BIRC5O15392 142 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 IMPDH2P12268 514 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 SYPL1Q16563 259 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 FAM174BQ3ZCQ3 159 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 OTUD3Q5T2D3 398 aaPredicted RBP20.15■□□□□ 0.82
SSBP2-203ENST00000504174 TSPO2Q5TGU0 170 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 PAQR6Q6TCH4 344 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 ABHD12BQ7Z5M8 362 aaPredicted RBP20.15■□□□□ 0.82
SSBP2-203ENST00000504174 RNF130Q86XS8 419 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 C10orf105Q8TEF2 133 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 WDR60Q8WVS4 1066 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 TRIM44Q96DX7 344 aaPredicted RBP20.15■□□□□ 0.82
SSBP2-203ENST00000504174 CCDC115Q96NT0 180 aa20.15■□□□□ 0.82
SSBP2-203ENST00000504174 PRAMEF27A3QJZ7 478 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 CFAP73A6NFT4 308 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 FAAHO00519 579 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 PHF1O43189 567 aaPredicted RBP20.14■□□□□ 0.81
SSBP2-203ENST00000504174 GPIP06744 558 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 IL7RP16871 459 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 MPGP29372 298 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 SLC1A6P48664 564 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 VSNL1P62760 191 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 PLAURQ03405 335 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 LRRC74BQ6ZQY2 392 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 ANKFN1Q8N957 763 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 TMEM45BQ96B21 275 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 PANX1Q96RD7 426 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 SLC38A1Q9H2H9 487 aa20.14■□□□□ 0.81
SSBP2-203ENST00000504174 MTHFD2LQ9H903 347 aaPredicted RBP20.14■□□□□ 0.81
SSBP2-203ENST00000504174 F12P00748 615 aaPredicted RBP20.13■□□□□ 0.81
SSBP2-203ENST00000504174 USF1P22415 310 aaPredicted RBP20.13■□□□□ 0.81
SSBP2-203ENST00000504174 LRRC74AQ0VAA2 488 aa20.13■□□□□ 0.81
SSBP2-203ENST00000504174 AAED1Q7RTV5 226 aa20.13■□□□□ 0.81
SSBP2-203ENST00000504174 ZNF440Q8IYI8 595 aa20.13■□□□□ 0.81
SSBP2-203ENST00000504174 POMGNT2Q8NAT1 580 aa20.13■□□□□ 0.81
SSBP2-203ENST00000504174 SF3B5Q9BWJ5 86 aaKnown RBP20.13■□□□□ 0.81
SSBP2-203ENST00000504174 NUF2Q9BZD4 464 aa20.13■□□□□ 0.81
SSBP2-203ENST00000504174 SHARPINQ9H0F6 387 aa20.13■□□□□ 0.81
SSBP2-203ENST00000504174 FKBP7Q9Y680 259 aa20.13■□□□□ 0.81
SSBP2-203ENST00000504174 CCDC154A6NI56 674 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 ATP6V1G2-DDX39BF2Z307 99 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 KRT33AO76009 404 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 DBIP07108 87 aaKnown RBP20.12■□□□□ 0.81
SSBP2-203ENST00000504174 CHRM4P08173 479 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 NR2F1P10589 423 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 CDH2P19022 906 aaPredicted RBP20.12■□□□□ 0.81
SSBP2-203ENST00000504174 CXCR1P25024 350 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 LSM11P83369 360 aaKnown RBP eCLIP20.12■□□□□ 0.81
SSBP2-203ENST00000504174 SLC25A3Q00325 362 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 EPS8Q12929 822 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 GSTA3Q16772 222 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 MRPL2Q5T653 305 aaKnown RBP20.12■□□□□ 0.81
SSBP2-203ENST00000504174 OR9K2Q8NGE7 335 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 KCNS3Q9BQ31 491 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 TMEM109Q9BVC6 243 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 C20orf27Q9GZN8 174 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 PIF1Q9H611 641 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 PRDM4Q9UKN5 801 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 MOKQ9UQ07 419 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 CUBNO60494 3623 aa20.12■□□□□ 0.81
SSBP2-203ENST00000504174 HEATR1Q9H583 2144 aaKnown RBP20.11■□□□□ 0.81
SSBP2-203ENST00000504174 TM9SF1O15321 606 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 IGHV4-31P0DP07 118 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 ZNF16P17020 682 aaPredicted RBP20.11■□□□□ 0.81
SSBP2-203ENST00000504174 NME5P56597 212 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 CEACAM7Q14002 265 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 OR7A5Q15622 319 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 ZNF621Q6ZSS3 439 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 GPAT4Q86UL3 456 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 PEX5LQ8IYB4 626 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 NANOS1Q8WY41 292 aaKnown RBP20.11■□□□□ 0.81
SSBP2-203ENST00000504174 FBXO17Q96EF6 278 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 TAPBPLQ9BX59 468 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 OBP2BQ9NPH6 170 aa20.11■□□□□ 0.81
SSBP2-203ENST00000504174 YLPM1P49750 1951 aaKnown RBP20.11■□□□□ 0.81
SSBP2-203ENST00000504174 ANK3Q12955 4377 aaKnown RBP20.11■□□□□ 0.81
SSBP2-203ENST00000504174 ZC3H12DA2A288 527 aaKnown RBP20.1■□□□□ 0.81
SSBP2-203ENST00000504174 RGS16O15492 202 aaPredicted RBP20.1■□□□□ 0.81
SSBP2-203ENST00000504174 AKR7A3O95154 331 aa20.1■□□□□ 0.81
SSBP2-203ENST00000504174 RPS4Y1P22090 263 aaKnown RBP20.1■□□□□ 0.81
SSBP2-203ENST00000504174 PAX7P23759 505 aa20.1■□□□□ 0.81
SSBP2-203ENST00000504174 GZMKP49863 264 aa20.1■□□□□ 0.81
SSBP2-203ENST00000504174 PDLIM4P50479 330 aa20.1■□□□□ 0.81
SSBP2-203ENST00000504174 SNRPD2P62316 118 aaKnown RBP20.1■□□□□ 0.81
SSBP2-203ENST00000504174 KRT71Q3SY84 523 aa20.1■□□□□ 0.81
SSBP2-203ENST00000504174 TMEM225Q6GV28 225 aa20.1■□□□□ 0.81
SSBP2-203ENST00000504174 OGFOD2Q6N063 350 aa20.1■□□□□ 0.81
SSBP2-203ENST00000504174 TMEM99Q8N816 258 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms