RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 ESPNLQ6ZVH7 1005 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 CHMP1BQ7LBR1 199 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 GGNQ86UU5 652 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 TSPYL5Q86VY4 417 aaPredicted RBP9.01□□□□□ -0.97
NUP54-203ENST00000504173 OR2V1Q8NHB1 315 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 SLC38A4Q969I6 547 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 UTP4Q969X6 686 aaKnown RBP9.01□□□□□ -0.97
NUP54-203ENST00000504173 DDIT4LQ96D03 193 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 SLC41A3Q96GZ6 507 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 RSRC1Q96IZ7 334 aaKnown RBP9.01□□□□□ -0.97
NUP54-203ENST00000504173 RAB3IPQ96QF0 476 aaPredicted RBP9.01□□□□□ -0.97
NUP54-203ENST00000504173 OR5B2Q96R09 309 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 ZNF300Q96RE9 604 aaPredicted RBP9.01□□□□□ -0.97
NUP54-203ENST00000504173 OR11A1Q9GZK7 315 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 TP63Q9H3D4 680 aaPredicted RBP9.01□□□□□ -0.97
NUP54-203ENST00000504173 MAGIXQ9H6Y5 334 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 RIMS3Q9UJD0 308 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 TINAGQ9UJW2 476 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 SLC7A7Q9UM01 511 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 AURKCQ9UQB9 309 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 GTF3C1Q12789 2109 aa9.01□□□□□ -0.97
NUP54-203ENST00000504173 A0A087WUJ7 227 aa9□□□□□ -0.97
NUP54-203ENST00000504173 A0A0J9YW62 118 aa9□□□□□ -0.97
NUP54-203ENST00000504173 A0A1W2PNR3 127 aa9□□□□□ -0.97
NUP54-203ENST00000504173 A8MVM7 634 aa9□□□□□ -0.97
NUP54-203ENST00000504173 AHRRA9YTQ3 701 aa9□□□□□ -0.97
NUP54-203ENST00000504173 WDR1O75083 606 aa9□□□□□ -0.97
NUP54-203ENST00000504173 DIRAS1O95057 198 aa9□□□□□ -0.97
NUP54-203ENST00000504173 GPIP06744 558 aa9□□□□□ -0.97
NUP54-203ENST00000504173 THRBP10828 461 aa9□□□□□ -0.97
NUP54-203ENST00000504173 UMPSP11172 480 aa9□□□□□ -0.97
NUP54-203ENST00000504173 GABRA1P14867 456 aa9□□□□□ -0.97
NUP54-203ENST00000504173 NQO1P15559 274 aaKnown RBP9□□□□□ -0.97
NUP54-203ENST00000504173 RHCEP18577 417 aa9□□□□□ -0.97
NUP54-203ENST00000504173 ACVR2AP27037 513 aa9□□□□□ -0.97
NUP54-203ENST00000504173 CA7P43166 264 aa9□□□□□ -0.97
NUP54-203ENST00000504173 EIF1AXP47813 144 aaKnown RBP9□□□□□ -0.97
NUP54-203ENST00000504173 CLDN15P56746 228 aa9□□□□□ -0.97
NUP54-203ENST00000504173 VLDLRP98155 873 aa9□□□□□ -0.97
NUP54-203ENST00000504173 ST3GAL3Q11203 375 aa9□□□□□ -0.97
NUP54-203ENST00000504173 SF3B4Q15427 424 aaKnown RBP eCLIP9□□□□□ -0.972e-7■□□□□ 10.8
NUP54-203ENST00000504173 SGCBQ16585 318 aa9□□□□□ -0.97
NUP54-203ENST00000504173 EMC4Q5J8M3 183 aa9□□□□□ -0.97
NUP54-203ENST00000504173 HBMQ6B0K9 141 aa9□□□□□ -0.97
NUP54-203ENST00000504173 PPP4R4Q6NUP7 873 aa9□□□□□ -0.97
NUP54-203ENST00000504173 LSRQ86X29 649 aaPredicted RBP9□□□□□ -0.97
NUP54-203ENST00000504173 DOLPP1Q86YN1 238 aa9□□□□□ -0.97
NUP54-203ENST00000504173 ZDHHC21Q8IVQ6 265 aa9□□□□□ -0.97
NUP54-203ENST00000504173 ADGRG5Q8IZF4 528 aa9□□□□□ -0.97
NUP54-203ENST00000504173 OFCC1Q8IZS5 231 aa9□□□□□ -0.97
NUP54-203ENST00000504173 OR10D3Q8NH80 312 aa9□□□□□ -0.97
NUP54-203ENST00000504173 CANT1Q8WVQ1 401 aa9□□□□□ -0.97
NUP54-203ENST00000504173 DNAJA3Q96EY1 480 aa9□□□□□ -0.97
NUP54-203ENST00000504173 C14orf79Q96F83 325 aa9□□□□□ -0.97
NUP54-203ENST00000504173 MPP4Q96JB8 637 aa9□□□□□ -0.97
NUP54-203ENST00000504173 ADGRG7Q96K78 797 aa9□□□□□ -0.97
NUP54-203ENST00000504173 ARL5BQ96KC2 179 aa9□□□□□ -0.97
NUP54-203ENST00000504173 C7orf34Q96L11 122 aa9□□□□□ -0.97
NUP54-203ENST00000504173 TUBA1CQ9BQE3 449 aa9□□□□□ -0.97
NUP54-203ENST00000504173 FNDC11Q9BVV2 318 aa9□□□□□ -0.97
NUP54-203ENST00000504173 COQ10BQ9H8M1 238 aa9□□□□□ -0.97
NUP54-203ENST00000504173 IL1RAPQ9NPH3 570 aa9□□□□□ -0.97
NUP54-203ENST00000504173 PAQR5Q9NXK6 330 aaPredicted RBP9□□□□□ -0.97
NUP54-203ENST00000504173 NDUFAF4Q9P032 175 aa9□□□□□ -0.97
NUP54-203ENST00000504173 RHCGQ9UBD6 479 aa9□□□□□ -0.97
NUP54-203ENST00000504173 A4GNTQ9UNA3 340 aa9□□□□□ -0.97
NUP54-203ENST00000504173 HDGFL3Q9Y3E1 203 aa9□□□□□ -0.97
NUP54-203ENST00000504173 FLNAP21333 2647 aaKnown RBP9□□□□□ -0.97
NUP54-203ENST00000504173 RTTNQ86VV8 2226 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 TCRBV3S1A0A5B6 114 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 ZC3H12DA2A288 527 aaKnown RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 CLCA1A8K7I4 914 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 ADAMDEC1O15204 470 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 CXCL13O43927 109 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 LYPD3O95274 346 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 AHSA1O95433 338 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 SYNGR4O95473 234 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 MT-ND1P03886 318 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 THY1P04216 161 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 H1F0P07305 194 aaKnown RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 STSP08842 583 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 HOXD4P09016 255 aaPredicted RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 RAP2AP10114 183 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 PTNP21246 168 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 IDUAP35475 653 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 CLK1P49759 484 aaKnown RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 ART1P52961 327 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 CARD18P57730 90 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 SPIBQ01892 262 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 MYBPHQ13203 477 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 TRAM2Q15035 370 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 CTU2Q2VPK5 515 aaKnown RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 ACSF3Q4G176 576 aaPredicted RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 C1orf185Q5T7R7 199 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 C1orf140Q5VVS0 124 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 TTC33Q6PID6 262 aaPredicted RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 C5orf46Q6UWT4 87 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 C3P1Q6ZMU1 363 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 WDR88Q6ZMY6 472 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 TMPPEQ6ZT21 453 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms