RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 PBX2P40425 430 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 EIF1AXP47813 144 aaKnown RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 SLC6A9P48067 706 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 CXCR3P49682 368 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 DVL1P1P54792 670 aaPredicted RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 PCBP3P57721 371 aaKnown RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ARHGAP1Q07960 439 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 TWF1Q12792 350 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 KIAA0141Q14154 515 aaPredicted RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 GAMTQ14353 236 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 SLC10A1Q14973 349 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 JOSD1Q15040 202 aaPredicted RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 SURF2Q15527 256 aaPredicted RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 SLC5A12Q1EHB4 618 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 MST1LQ2TV78 715 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 MAJINQ3KP22 176 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 C2orf76Q3KRA6 126 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 RAB41Q5JT25 222 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OR2G6Q5TZ20 316 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 AWAT2Q6E213 333 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 SFRP4Q6FHJ7 346 aaPredicted RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ABLIM2Q6H8Q1 611 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 C11orf87Q6NUJ2 197 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ACSM5Q6NUN0 579 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 CDC42EP5Q6NZY7 148 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 SLC22A25Q6T423 547 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ENPP7Q6UWV6 458 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 CLEC9AQ6UXN8 241 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 APOOLQ6UXV4 268 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 LBX2Q6XYB7 198 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 B3GLCTQ6Y288 498 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 FAM83HQ6ZRV2 1179 aaPredicted RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ZNF621Q6ZSS3 439 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 LHFPL2Q6ZUX7 228 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 CXXC5Q7LFL8 322 aaKnown RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OVCH1Q7RTY7 1134 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 TP53INP2Q8IXH6 220 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 C9orf40Q8IXQ3 194 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 AGBL5Q8NDL9 886 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OR10A7Q8NGE5 316 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OR1J2Q8NGS2 313 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OR1J1Q8NGS3 322 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OR6N1Q8NGY5 312 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OR4L1Q8NH43 312 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OR5W2Q8NH69 310 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 NUDCD2Q8WVJ2 157 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 RAB40AQ8WXH6 277 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OTUB2Q96DC9 234 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 CXorf40BQ96DE9 158 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 GALNT14Q96FL9 552 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 BSCL2Q96G97 398 aaPredicted RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 SAMD8Q96LT4 415 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 HSPA12BQ96MM6 686 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 FCRL4Q96PJ5 515 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 CDK15Q96Q40 435 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 STACQ99469 402 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ADAM2Q99965 735 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 PDCD2LQ9BRP1 358 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ZNF649Q9BS31 505 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 TMEM208Q9BTX3 173 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ADAT1Q9BUB4 502 aaKnown RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ACPTQ9BZG2 426 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 OR51B6Q9H340 312 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 SMDT1Q9H4I9 107 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 CWH43Q9H720 699 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 EXO5Q9H790 373 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 TMEM185BQ9H7F4 350 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 IPPKQ9H8X2 491 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 RHOFQ9HBH0 211 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 LHX9Q9NQ69 397 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ASF1BQ9NVP2 202 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 MARCH5Q9NX47 278 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 BTG4Q9NY30 223 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 UPB1Q9UBR1 384 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ZNF282Q9UDV7 671 aaPredicted RBP5.53□□□□□ -1.52
LINC01340-201ENST00000504012 CPA4Q9UI42 421 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 KCNE5Q9UJ90 142 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 FZD4Q9ULV1 537 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 PPT2Q9UMR5 302 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ST3GAL5Q9UNP4 418 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 FLVCR2Q9UPI3 526 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 MOKQ9UQ07 419 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 WIF1Q9Y5W5 379 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 IRAK3Q9Y616 596 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 V9GYS6 101 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 ANK1P16157 1881 aa5.53□□□□□ -1.52
LINC01340-201ENST00000504012 TRBV6-7A0A0A0MS04 114 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 TEX13DA0A0J9YY54 714 aaPredicted RBP5.52□□□□□ -1.53
LINC01340-201ENST00000504012 C7orf77A4D0Y5 90 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 OR5H15A6NDH6 313 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 NPEPPSL1A6NEC2 478 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 PGPEP1LA6NFU8 196 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 PRAMEF25A6NGN4 478 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 OR5H1A6NKK0 313 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 A6NLC8 198 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 OR6C76A6NM76 312 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 YDJCA8MPS7 323 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 FAM157AC9JC47 383 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 ANHXE9PGG2 379 aa5.52□□□□□ -1.53
LINC01340-201ENST00000504012 FAM72CH0Y354 149 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms