RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 RAP1BP61224 184 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 RAP1AP62834 184 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 S100A12P80511 92 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 FUT7Q11130 342 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ASAH1Q13510 395 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 SF3A2Q15428 464 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 TRMT12Q53H54 448 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 HBMQ6B0K9 141 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 NIPAL3Q6P499 406 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 FIGNL1Q6PIW4 674 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 UBALD2Q8IYN6 164 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 IQCF1Q8N6M8 205 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 OR9A4Q8NGU2 314 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 CHAC2Q8WUX2 184 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ASB17Q8WXJ9 295 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 THAP4Q8WY91 577 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 HOXB13Q92826 284 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 NAT6Q93015 286 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 PEX11GQ96HA9 241 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 DPH1Q9BZG8 443 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 OR51V1Q9H2C8 321 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 EGLN3Q9H6Z9 239 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 LTB4R2Q9NPC1 389 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 C14orf119Q9NWQ9 140 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 EIF3KQ9UBQ5 218 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 NUFIP1Q9UHK0 495 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 PCYT1BQ9Y5K3 369 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 MAU2Q9Y6X3 613 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 NOTCH4Q99466 2003 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 KIAA1549LQ6ZVL6 1849 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 MUC22E2RYF6 1773 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ZNF860A6NHJ4 632 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 TO15178 435 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 FLRT2O43155 660 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ZNF264O43296 627 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 LDB3O75112 727 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 NGFRP08138 427 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 FUT1P19526 365 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 MSX1P28360 303 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ERP29P30040 261 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ZNF81P51508 661 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 AFF3P51826 1226 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 SUMO3P55854 103 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 SCAND1P57086 179 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 CRYZQ08257 329 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 IL18Q14116 193 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 C22orf42Q6IC83 251 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 PLBD1Q6P4A8 553 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 TRILQ7L0X0 811 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 SIMC1Q8NDZ2 872 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 C17orf47Q8NEP4 570 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 OR6S1Q8NH40 331 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ZNF431Q8TF32 576 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ADAMTS14Q8WXS8 1223 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 RPL3LQ92901 407 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 SNX18Q96RF0 628 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 MFRPQ9BY79 579 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 NANSQ9NR45 359 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 GRHPRQ9UBQ7 328 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ICAM5Q9UMF0 924 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 LOC105369274A0A096LPK9 316 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 A0A0A6YYC8 382 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 LOC102723532A0A0G2JNH3 316 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 A0A1W2PQD3 144 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 FITM1A5D6W6 292 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 PRAMEF25A6NGN4 478 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 C17orf105B2RV13 164 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 I3L1I5 382 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 SHOXO15266 292 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 RNF13O43567 381 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 NARSO43776 548 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 SSNA1O43805 119 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 FCMRO60667 390 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 GPX5O75715 221 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 STATHP02808 62 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 IGHV4-34P06331 123 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 PVALBP20472 110 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 RBMS1P29558 406 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 CRYBB2P43320 205 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 SLC25A1P53007 311 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 RPS3AP61247 264 aaKnown RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 POLR2GP62487 172 aaKnown RBP eCLIP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 CBFBQ13951 182 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 MAJINQ3KP22 176 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ATAD3CQ5T2N8 411 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 KCTD18Q6PI47 426 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 SHFQ7M4L6 423 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ATCAYQ86WG3 371 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 NKAIN4Q8IVV8 208 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 OR4N4Q8N0Y3 316 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 DNAJC5GQ8N7S2 189 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 ZNF671Q8TAW3 534 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 FRMD6Q96NE9 622 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 MACROD1Q9BQ69 325 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 DPCDQ9BVM2 203 aaPredicted RBP6.83□□□□□ -1.32
PDGFC-203ENST00000502773 PTTG3PQ9NZH4 202 aa6.83□□□□□ -1.32
PDGFC-203ENST00000502773 CKAP5Q14008 2032 aa6.82□□□□□ -1.32
PDGFC-203ENST00000502773 TRAV1-2A0A0B4J238 106 aa6.82□□□□□ -1.32
PDGFC-203ENST00000502773 A0A1B0GTQ1 180 aa6.82□□□□□ -1.32
PDGFC-203ENST00000502773 A0A1W2PQL4 384 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms