RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ARFGAP2Q8N6H7 521 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 ZIC4Q8N9L1 334 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 ZNF540Q8NDQ6 660 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 CNOT9Q92600 299 aaKnown RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 RAB8BQ92930 207 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 TMEM45BQ96B21 275 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 ZNF385AQ96PM9 386 aaKnown RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 KCNS3Q9BQ31 491 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 NAA11Q9BSU3 229 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 MECRQ9BV79 373 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 PLK3Q9H4B4 646 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 EXOSC3Q9NQT5 275 aaKnown RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 EXD2Q9NVH0 621 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 TMEFF2Q9UIK5 374 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-212ENST00000498540 MID2Q9UJV3 735 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 OSGIN1Q9UJX0 560 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 PCDHGB4Q9UN71 923 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 TMED7Q9Y3B3 224 aa12.78□□□□□ -0.36
TRAF4-212ENST00000498540 NPHS1O60500 1241 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 LILRA1O75019 489 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 PDE5AO76074 875 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 TACSTD2P09758 323 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 G6PDP11413 515 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 GIFP27352 417 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 APEX1P27695 318 aaKnown RBP12.77□□□□□ -0.37
TRAF4-212ENST00000498540 ARRB2P32121 409 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 SRP14P37108 136 aaKnown RBP12.77□□□□□ -0.37
TRAF4-212ENST00000498540 IDH3GP51553 393 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-212ENST00000498540 KCNJ10P78508 379 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 LGALS3BPQ08380 585 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 EFNB3Q15768 340 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 TBRG1Q3YBR2 411 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 OTUD3Q5T2D3 398 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-212ENST00000498540 AP1ARQ63HQ0 302 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 PAQR6Q6TCH4 344 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 C12orf54Q6X4T0 127 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 ZCCHC23Q6ZST2 131 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 AAED1Q7RTV5 226 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 IFT20Q8IY31 132 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 POMGNT2Q8NAT1 580 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 OR9K2Q8NGE7 335 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 EPS8L3Q8TE67 593 aaKnown RBP12.77□□□□□ -0.37
TRAF4-212ENST00000498540 XAGE5Q8WWM1 108 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 OIT3Q8WWZ8 545 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 ROPN1LQ96C74 230 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 DDIT4LQ96D03 193 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 BOD1Q96IK1 185 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 SNX18Q96RF0 628 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 KATNB1Q9BVA0 655 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 ADAM19Q9H013 955 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 SAP130Q9H0E3 1048 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 SEC61A2Q9H9S3 476 aa12.77□□□□□ -0.37
TRAF4-212ENST00000498540 PRAMEF27A3QJZ7 478 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 NR5A2O00482 541 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 ZNF208O43345 1280 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 SPRY1O43609 319 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-212ENST00000498540 AKR7A3O95154 331 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 LGI1O95970 557 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 CRYAAP02489 173 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 GUSBP08236 651 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 CECR9P0C854 216 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 DAOP14920 347 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 TACR3P29371 465 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 CALCRP30988 508 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 HTR3AP46098 478 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 POLR2HP52434 150 aaKnown RBP12.76□□□□□ -0.37
TRAF4-212ENST00000498540 CHN2P52757 468 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 TUBA1BP68363 451 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 TUBA4AP68366 448 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 NAAAQ02083 359 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 ATAD3BQ5T9A4 648 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 RINLQ6ZS11 566 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 TUBA1AQ71U36 451 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 ZCCHC24Q8N2G6 241 aaKnown RBP12.76□□□□□ -0.37
TRAF4-212ENST00000498540 TMEM99Q8N816 258 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 LINC01356Q8N9X3 169 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 OR4A15Q8NGL6 344 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 OR1K1Q8NGR3 316 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 AURKBQ96GD4 344 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-212ENST00000498540 RAB1BQ9H0U4 201 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 OBP2BQ9NPH6 170 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 POLE3Q9NRF9 147 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 MEGF8Q7Z7M0 2845 aa12.76□□□□□ -0.37
TRAF4-212ENST00000498540 RNASET2O00584 256 aaKnown RBP12.75□□□□□ -0.37
TRAF4-212ENST00000498540 VENTXO95231 258 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 AGR2O95994 175 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 C1QCP02747 245 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 CDH15P55291 814 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 CLDN8P56748 225 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 CEACAM7Q14002 265 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 TRIP10Q15642 601 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 ANKRD16Q6P6B7 361 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 LINGO2Q7L985 606 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 GPAT4Q86UL3 456 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 MYPOPQ86VE0 399 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-212ENST00000498540 ANKRD46Q86W74 232 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 HOMEZQ8IX15 550 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 PMM1Q92871 262 aa12.75□□□□□ -0.37
TRAF4-212ENST00000498540 HPS1Q92902 700 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms