RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SLC38A9Q8NBW4 561 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 FAM71CQ8NEG0 241 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR56B2PQ8NGI1 322 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR52I1Q8NGK6 324 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 LHFPL5Q8TAF8 219 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NEIL3Q8TAT5 605 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 WFIKKN2Q8TEU8 576 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 GLYATL2Q8WU03 294 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 HDAC7Q8WUI4 952 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SNRNP27Q8WVK2 155 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 DIO2Q92813 273 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CABS1Q96KC9 395 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TECTBQ96PL2 329 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ELF4Q99607 663 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 RARRES2Q99969 163 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MENTQ9BUN1 341 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZMYND12Q9H0C1 365 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TMEM117Q9H0C3 514 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR52A5Q9H2C5 316 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ARRDC1-AS1Q9H2J1 176 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CDCP1Q9H5V8 836 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 GCM1Q9NP62 436 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 FANCFQ9NPI8 374 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NLRC4Q9NPP4 1024 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CYSLTR2Q9NS75 346 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 C14orf119Q9NWQ9 140 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZNF226Q9NYT6 803 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 HACD3Q9P035 362 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TAAR3PQ9P1P4 343 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 STOX2Q9P2F5 926 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 FEM1BQ9UK73 627 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NPC1L1Q9UHC9 1359 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PKDREJQ9NTG1 2253 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 A0A087WZY1 265 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 LOC105369274A0A096LPK9 316 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 BBIP1A8MTZ0 92 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 BTBD18B2RXH4 712 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 WNT9AO14904 365 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CLOCKO15516 846 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 LAMTOR5O43504 91 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CDH16O75309 829 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CSO75390 466 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 APODP05090 189 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CT45A8P0DMV1 189 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CT45A9P0DMV2 189 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NR2C1P13056 603 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZP3P21754 424 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 RRM2P31350 389 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ACADSBP45954 432 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SLC6A11P48066 632 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CDC34P49427 236 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 SERPINH1P50454 418 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 BMXP51813 675 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 EFNB2P52799 333 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 BCAT1P54687 386 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MRPS22P82650 360 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 C17orf67Q0P5P2 114 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CETN1Q12798 172 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 GPR68Q15743 365 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TOMM34Q15785 309 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZBTB6Q15916 424 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZNF876PQ49A33 203 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CFAP221Q4G0U5 840 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CT45A2Q5DJT8 189 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PLAC9Q5JTB6 97 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 H3F3CQ6NXT2 135 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PNCKQ6P2M8 343 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ERICH5Q6P6B1 374 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 UQCC3Q6UW78 93 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 FKBP9P1Q75LS8 142 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SLC35D2Q76EJ3 337 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 KIAA0907Q7Z7F0 614 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 DOLPP1Q86YN1 238 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 DENND1CQ8IV53 801 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ARHGAP12Q8IWW6 846 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR4N4Q8N0Y3 316 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CNPY4Q8N129 248 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CYP4Z2PQ8N1L4 340 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NOA1Q8NC60 698 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 SLC24A4Q8NFF2 622 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR2T34Q8NGX1 318 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR2T3Q8NH03 318 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CT45A3Q8NHU0 189 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 FAM71BQ8TC56 605 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SNX22Q96L94 193 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TIMP4Q99727 224 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MANSC1Q9H8J5 431 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 RDH14Q9HBH5 336 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 A4GALTQ9NPC4 353 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MRPL39Q9NYK5 338 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 GRHPRQ9UBQ7 328 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZNF221Q9UK13 617 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SARDHQ9UL12 918 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PIGLQ9Y2B2 252 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 LSM5Q9Y4Y9 91 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 CAPN7Q9Y6W3 813 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 METP08581 1390 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ABCC11Q96J66 1382 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PLEKHH1Q9ULM0 1364 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NINQ8N4C6 2090 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms