RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 GMPPBQ9Y5P6 360 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 SELENOKQ9Y6D0 94 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 PAPPAQ13219 1627 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 PCDH11XQ9BZA7 1347 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 A0A1B0GUS0 222 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 TNFRSF13BO14836 293 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 RGS16O15492 202 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 PSTPIP1O43586 416 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 AIREO43918 545 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 HUS1O60921 280 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 OAZ2O95190 189 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 SMC2O95347 1197 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 ZBTB11O95625 1053 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 SYF2O95926 243 aaKnown RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 JCHAINP01591 159 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 MMP1P03956 469 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 ANXA5P08758 320 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 FRMD6-AS1P0C7T7 363 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 HOXB8P17481 243 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 BCKDHBP21953 392 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 ATP5A1P25705 553 aaKnown RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 IL12BP29460 328 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 S100A5P33763 92 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 SAA4P35542 130 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 RPL4P36578 427 aaKnown RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 MAP3K8P41279 467 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 HAAOP46952 286 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 NPBWR2P48146 333 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 STK19P49842 368 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 SKP1P63208 163 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 RIPPLY1Q0D2K3 151 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 RAB40BQ12829 278 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 DLG1Q12959 904 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 SNTA1Q13424 505 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 EIF2B1Q14232 305 aaKnown RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 PSG3Q16557 428 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 ISXQ2M1V0 245 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 ULK3Q6PHR2 472 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 LRRC31Q6UY01 552 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 BHLHA15Q7RTS1 189 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 HDDC2Q7Z4H3 204 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 TSEN54Q7Z6J9 526 aaKnown RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 SLC22A15Q8IZD6 547 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 OR52E5Q8NH55 327 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 PIH1D2Q8WWB5 315 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 FCAMRQ8WWV6 532 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 TNFRSF14Q92956 283 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 CD101Q93033 1021 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 C2orf48Q96LS8 159 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF385AQ96PM9 386 aaKnown RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 PSD2Q9BQI7 771 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 UQCC2Q9BRT2 126 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 SYT11Q9BT88 431 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 RBM4Q9BWF3 364 aaKnown RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 NDEL1Q9GZM8 345 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 PRSS22Q9GZN4 317 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 NANSQ9NR45 359 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 BFARQ9NZS9 450 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF229Q9UJW7 825 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 POU2F3Q9UKI9 436 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 EXOGQ9Y2C4 368 aaKnown RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 CBY1Q9Y3M2 126 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 MMP24Q9Y5R2 645 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 HS3ST3B1Q9Y662 390 aa5.21□□□□□ -1.58
BRCA1-224ENST00000497488 KDM6AO15550 1401 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-224ENST00000497488 IGLV5-45A0A087WSX0 123 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 OR6C65A6NJZ3 312 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 SCAMP2O15127 329 aaKnown RBP5.2□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF853P0CG23 659 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 SLC2A2P11168 524 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-224ENST00000497488 LIFP15018 202 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 CFHR2P36980 270 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 MRPL19P49406 292 aaKnown RBP5.2□□□□□ -1.58
BRCA1-224ENST00000497488 BLVRAP53004 296 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 TMEM50BP56557 158 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 LCN2P80188 198 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 RBBP4Q09028 425 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 RAB35Q15286 201 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 MOGAT2Q3SYC2 334 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 Q4G0T1 1027 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 IRAK1BP1Q5VVH5 260 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 STUMQ69YW2 141 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF470Q6ECI4 717 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 PTRHD1Q6GMV3 140 aaKnown RBP5.2□□□□□ -1.58
BRCA1-224ENST00000497488 NADSYN1Q6IA69 706 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 PRR5LQ6MZQ0 368 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 FAHD2BQ6P2I3 314 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-224ENST00000497488 Q6ZPA2 131 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 Q6ZSR3 168 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 GPRIN3Q6ZVF9 776 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 ISCA2Q86U28 154 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 SFR1Q86XK3 245 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 C15orf54Q8N8G6 183 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF441Q8N8Z8 693 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 OR7G1Q8NGA0 311 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 OR10H4Q8NGA5 316 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 OR1K1Q8NGR3 316 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 OR6F1Q8NGZ6 308 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 PLPPR1Q8TBJ4 325 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms