RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 LACC1Q8IV20 430 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 C9orf40Q8IXQ3 194 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 PRSS58Q8IYP2 241 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 HS3ST5Q8IZT8 346 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 ZNF619Q8N2I2 560 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 CLIP4Q8N3C7 705 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 SVOPLQ8N434 492 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 CBR4Q8N4T8 237 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 SLC15A4Q8N697 577 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 APCDD1LQ8NCL9 501 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 ICA1LQ8NDH6 482 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 OR4N2Q8NGD1 307 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 OR1N1Q8NGS0 311 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 OR52P1PQ8NH57 321 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 OR5K1Q8NHB7 308 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 GPR151Q8TDV0 419 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 TMEM171Q8WVE6 324 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 RASSF5Q8WWW0 418 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 LZICQ8WZA0 190 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 DAZLQ92904 295 aaKnown RBP4.88□□□□□ -1.63
GGPS1-208ENST00000497327 EME1Q96AY2 570 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 NRBF2Q96F24 287 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 TPD52L3Q96J77 140 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 ZNF570Q96NI8 536 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 ZNF347Q96SE7 839 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 BARD1Q99728 777 aaKnown RBP4.88□□□□□ -1.63
GGPS1-208ENST00000497327 PIP5K1AQ99755 562 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 PSD2Q9BQI7 771 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 FUZQ9BT04 418 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 C9orf16Q9BUW7 83 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 OSBPL10Q9BXB5 764 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 PINK1Q9BXM7 581 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 ITPAQ9BY32 194 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 DPH1Q9BZG8 443 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 ULBP3Q9BZM4 244 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 B3GNT4Q9C0J1 378 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 STRADBQ9C0K7 418 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 SLC7A5P2Q9GIP4 190 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 GABARAPL1Q9H0R8 117 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 VCX3BQ9H321 246 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 C8orf4Q9NR00 106 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 ACER3Q9NUN7 267 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 USE1Q9NZ43 259 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 AKAP7Q9P0M2 348 aaPredicted RBP4.88□□□□□ -1.63
GGPS1-208ENST00000497327 IFT80Q9P2H3 777 aaPredicted RBP4.88□□□□□ -1.63
GGPS1-208ENST00000497327 PRODH2Q9UF12 536 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 C3orf18Q9UK00 162 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 NXT1Q9UKK6 140 aaKnown RBP4.88□□□□□ -1.63
GGPS1-208ENST00000497327 BAG5Q9UL15 447 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 MKLN1Q9UL63 735 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 CFL2Q9Y281 166 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 SH3GLB1Q9Y371 365 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 WDR45Q9Y484 360 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 DNAH14Q0VDD8 3507 aa4.88□□□□□ -1.63
GGPS1-208ENST00000497327 AHCTF1Q8WYP5 2266 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 SAGE2PA6NJ88 616 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 OR6C76A6NM76 312 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 G3V2T6 193 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 J3KTA2 159 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 PEX12O00623 359 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 EI24O14681 340 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 FRS3O43559 492 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 PRKNO60260 465 aaPredicted RBP4.87□□□□□ -1.63
GGPS1-208ENST00000497327 BCAS1O75363 584 aaPredicted RBP4.87□□□□□ -1.63
GGPS1-208ENST00000497327 UGT2B17O75795 530 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 STK17BO94768 372 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 DIRAS1O95057 198 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 LYPD3O95274 346 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 HPRP00739 348 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 IFNW1P05000 195 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 ALPLP05186 524 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 ALPPP05187 535 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 DBIP07108 87 aaKnown RBP4.87□□□□□ -1.63
GGPS1-208ENST00000497327 KLK3P07288 261 aaPredicted RBP4.87□□□□□ -1.63
GGPS1-208ENST00000497327 HEXBP07686 556 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 RAB40ALP0C0E4 278 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 PRF1P14222 555 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 UQCRBP14927 111 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 ACADSP16219 412 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 ITGA2P17301 1181 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 RHCEP18577 417 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 ATP6V1C1P21283 382 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 PRKACGP22612 351 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 SLC5A2P31639 672 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 THBS4P35443 961 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 ALDH3A2P51648 485 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 ZNF136P52737 540 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
GGPS1-208ENST00000497327 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
GGPS1-208ENST00000497327 DCAF7P61962 342 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 PPP1R8Q12972 351 aaKnown RBP4.87□□□□□ -1.63
GGPS1-208ENST00000497327 DAG1Q14118 895 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 GK3PQ14409 553 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 NCF4Q15080 339 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 RBMS2Q15434 407 aaKnown RBP4.87□□□□□ -1.63
GGPS1-208ENST00000497327 TWIST1Q15672 202 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 ZNF311Q5JNZ3 666 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 C10orf25Q5T742 122 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 MFSD4BQ5TF39 518 aa4.87□□□□□ -1.63
GGPS1-208ENST00000497327 HES3Q5TGS1 186 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms