RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 OCMP0CE72 109 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 SLC2A3P11169 496 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 MBL2P11226 248 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 GFAPP14136 432 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 LBPP18428 481 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 OGNP20774 298 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 GPX3P22352 226 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 RFC2P35250 354 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ADRA1AP35348 466 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 GRIA1P42261 906 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 RPS9P46781 194 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 GSK3BP49841 420 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 BCAP31P51572 246 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 HNRNPFP52597 415 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 DAOAP59103 153 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CXCR4P61073 352 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 HERVK_113P63132 956 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CDKL1Q00532 357 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ACVR1Q04771 509 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ADIGQ0VDE8 80 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CBX3Q13185 183 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 TNK1Q13470 666 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 RCAN2Q14206 197 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CYTH1Q15438 398 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 RGS21Q2M5E4 152 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 AGKQ53H12 422 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CCDC92Q53HC0 331 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 KRBOX4Q5JUW0 171 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 PM20D1Q6GTS8 502 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 TCEAL6Q6IPX3 200 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 NEPROQ6NW34 567 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 RPUSD3Q6P087 351 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 TTC23LQ6PF05 361 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 C16orf87Q6PH81 154 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ZNF773Q6PK81 442 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 C16orf54Q6UWD8 224 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 FAM43BQ6ZT52 329 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CMC1Q7Z7K0 106 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CLVS1Q8IUQ0 354 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 DEFB106AQ8N104 65 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ZNF786Q8N393 782 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CARNMT1Q8N4J0 409 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ATPAF2Q8N5M1 289 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 RTL3Q8N8U3 475 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 C12orf29Q8N999 325 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 OR13F1Q8NGS4 319 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 GIPC3Q8TF64 312 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 NABP1Q96AH0 204 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 C12orf43Q96C57 262 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 TMA16Q96EY4 203 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 VMP1Q96GC9 406 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CPB2Q96IY4 423 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 PIWIL1Q96J94 861 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 PLEKHA8Q96JA3 519 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CCDC115Q96NT0 180 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CGREF1Q99674 301 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 MRPL45Q9BRJ2 306 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ALKBH7Q9BT30 221 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ERVK-6Q9BXR3 956 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 UGT2B28Q9BY64 529 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 SLC25A51Q9H1U9 297 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 MFSD1Q9H3U5 465 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 POMKQ9H5K3 350 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 WDR55Q9H6Y2 383 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 MARCH7Q9H992 704 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 PARVBQ9HBI1 364 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 SYTL2Q9HCH5 934 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 CCNB1IP1Q9NPC3 277 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 HPS4Q9NQG7 708 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 TREX1Q9NSU2 369 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 GPATCH2LQ9NWQ4 482 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 DUS2Q9NX74 493 aaKnown RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 USE1Q9NZ43 259 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 SEPT10Q9P0V9 454 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 SUN2Q9UH99 717 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 LEF1Q9UJU2 399 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 FBXO5Q9UKT4 447 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 PSME2Q9UL46 239 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 SPATA2Q9UM82 520 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 PLCL2Q9UPR0 1127 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ERVW-1Q9UQF0 538 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 ERGIC3Q9Y282 383 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 KLK4Q9Y5K2 254 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 MN1Q10571 1320 aaPredicted RBP3.16□□□□□ -1.9
TRIM4-205ENST00000496896 NRCAMQ92823 1304 aa3.16□□□□□ -1.9
TRIM4-205ENST00000496896 MYO18AQ92614 2054 aaKnown RBP3.15□□□□□ -1.9
TRIM4-205ENST00000496896 COL4A5P29400 1685 aa3.15□□□□□ -1.9
TRIM4-205ENST00000496896 TRGV8A0A0C4DH27 118 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 A0A0J9YYE9 177 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 FUOMA2VDF0 154 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 A8MT66 165 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CLDN25C9JDP6 229 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 LMO7DNF2Z398 122 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 H3BMQ9 156 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 M0QX08 132 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 KCNK1O00180 336 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 NME4O00746 187 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 FBP2O00757 339 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 AZIN1O14977 448 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SIGLEC5O15389 551 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms