RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 TRMT5Q32P41 509 aaKnown RBP13.02□□□□□ -0.33
ATG4B-224ENST00000494132 OTUD3Q5T2D3 398 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-224ENST00000494132 NANOGP8Q6NSW7 305 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 DHRS4L2Q6PKH6 230 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 PAMR1Q6UXH9 720 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 ATG4DQ86TL0 474 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-224ENST00000494132 ARMC8Q8IUR7 673 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 P3H2Q8IVL5 708 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 POU5F2Q8N7G0 328 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 C11orf65Q8NCR3 313 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 RNF217Q8TC41 542 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 ZNF317Q96PQ6 595 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-224ENST00000494132 ZNF607Q96SK3 696 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 TACO1Q9BSH4 297 aaKnown RBP13.02□□□□□ -0.33
ATG4B-224ENST00000494132 SPATA5L1Q9BVQ7 753 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 KAT8Q9H7Z6 458 aaKnown RBP13.02□□□□□ -0.33
ATG4B-224ENST00000494132 NANOGQ9H9S0 305 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 FANCFQ9NPI8 374 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 RPS6KB2Q9UBS0 482 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 USP22Q9UPT9 525 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.33
ATG4B-224ENST00000494132 NOSIPQ9Y314 301 aaKnown RBP13.02□□□□□ -0.33
ATG4B-224ENST00000494132 OTOGQ6ZRI0 2925 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 LIPT2A6NK58 231 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 ELOA3DA6NLF2 546 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-224ENST00000494132 A8MVM7 634 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 TMEM229AB2RXF0 380 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 M0R3H8 397 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 FXYD1O00168 92 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 MRASO14807 208 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 MFN2O95140 757 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 PSMB1P20618 241 aaKnown RBP13.01□□□□□ -0.33
ATG4B-224ENST00000494132 FKBP2P26885 142 aaKnown RBP13.01□□□□□ -0.33
ATG4B-224ENST00000494132 RPS5P46782 204 aaKnown RBP13.01□□□□□ -0.33
ATG4B-224ENST00000494132 PCBP3P57721 371 aaKnown RBP13.01□□□□□ -0.33
ATG4B-224ENST00000494132 H3F3AP84243 136 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 EGR4Q05215 589 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 ELOA3BQ3SY89 546 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 SFRP5Q5T4F7 317 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 C1orf140Q5VVS0 124 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 UBE2J2Q8N2K1 259 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 ELOA3Q8NG57 546 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 OR52E4Q8NGH9 312 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 KISS1RQ969F8 398 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-224ENST00000494132 SLC25A36Q96CQ1 311 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 TAPBPLQ9BX59 468 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 EMC3Q9P0I2 261 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 GPR52Q9Y2T5 361 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 CAPN7Q9Y6W3 813 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 ALPK2Q86TB3 2170 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 ARID1AO14497 2285 aa13.01□□□□□ -0.33
ATG4B-224ENST00000494132 IGKV3D-15A0A087WSY6 115 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13□□□□□ -0.33
ATG4B-224ENST00000494132 A0A1B0GWA3 101 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 M0QX08 132 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 DNPH1O43598 174 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 TPST2O60704 377 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 SERPINB7O75635 380 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 PLAUP00749 431 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 GPIP06744 558 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 IGHV1-2P23083 117 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 DNASE1P24855 282 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 LOXP28300 417 aaPredicted RBP13□□□□□ -0.33
ATG4B-224ENST00000494132 SLC16A1P53985 500 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 FOXG1P55316 489 aaPredicted RBP13□□□□□ -0.33
ATG4B-224ENST00000494132 NCALDP61601 193 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 KEAP1Q14145 624 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 PDK3Q15120 406 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 TESK1Q15569 626 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 TAB1Q15750 504 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 STK11Q15831 433 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 DUSP7Q16829 419 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 PAQR6Q6TCH4 344 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 CASP12Q6UXS9 341 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 Q6ZT83 130 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 BHLHA15Q7RTS1 189 aaPredicted RBP13□□□□□ -0.33
ATG4B-224ENST00000494132 NET1Q7Z628 596 aaPredicted RBP13□□□□□ -0.33
ATG4B-224ENST00000494132 GPAT4Q86UL3 456 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 GPR32P1Q8NGA4 272 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 APH1AQ96BI3 265 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 LRRC58Q96CX6 371 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 NAA11Q9BSU3 229 aaPredicted RBP13□□□□□ -0.33
ATG4B-224ENST00000494132 POTEKPQ9BYX7 375 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 UBTD1Q9HAC8 227 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 SEC14L4Q9UDX3 406 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 SLC13A4Q9UKG4 626 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 FLVCR1Q9Y5Y0 555 aa13□□□□□ -0.33
ATG4B-224ENST00000494132 TEP1Q99973 2627 aaKnown RBP12.99□□□□□ -0.33
ATG4B-224ENST00000494132 KLF4O43474 513 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 ATP8B1O43520 1251 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 EIF1BO60739 113 aaKnown RBP12.99□□□□□ -0.33
ATG4B-224ENST00000494132 NPIPB7O75200 414 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 MRPL33O75394 65 aaKnown RBP12.99□□□□□ -0.33
ATG4B-224ENST00000494132 RAD51DO75771 328 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 GOSR1O95249 250 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 ATE1O95260 518 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 AHSA1O95433 338 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 RAF1P04049 648 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 PPP3CBP16298 524 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 CBLP22681 906 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms