RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 LHX2P50458 406 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 NUP107P57740 925 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 SLC35A1P78382 337 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 PRKCDQ05655 676 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 CRYZQ08257 329 aaKnown RBP11.19□□□□□ -0.62
SNX17-208ENST00000493711 RCN1Q15293 331 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 MICAQ29983 383 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 EXOC3L2Q2M3D2 409 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 ANKDD1AQ495B1 522 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 SHQ1Q6PI26 577 aaKnown RBP11.19□□□□□ -0.62
SNX17-208ENST00000493711 TMPPEQ6ZT21 453 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 CHMP1BQ7LBR1 199 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 OR4K5Q8NGD3 323 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 OR5M1Q8NGP8 315 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 OR2V1Q8NHB1 315 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 GIPC3Q8TF64 312 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 MIB2Q96AX9 1013 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 TIMP4Q99727 224 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 PSD2Q9BQI7 771 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 PRDM14Q9GZV8 571 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 TSPAN10Q9H1Z9 355 aaPredicted RBP11.19□□□□□ -0.62
SNX17-208ENST00000493711 C8orf4Q9NR00 106 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 ASF1BQ9NVP2 202 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 MGAT4BQ9UQ53 548 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 CORINQ9Y5Q5 1042 aa11.19□□□□□ -0.62
SNX17-208ENST00000493711 IGKV1D-42A0A075B6H8 117 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 TRBV4-1A0A0J9YWV2 114 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 AHRRA9YTQ3 701 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 G3V2T6 193 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 SULT2B1O00204 365 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 OR10H3O60404 316 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 HIST1H2ABP04908 130 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 ANPEPP15144 967 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 GSTM3P21266 225 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 GTF2E2P29084 291 aaKnown RBP11.18□□□□□ -0.62
SNX17-208ENST00000493711 PTGS2P35354 604 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 SLC9A3P48764 834 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 TDGF1P3P51864 188 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 CLDN18P56856 261 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 CARD18P57730 90 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 RAC3P60763 192 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 EGR4Q05215 589 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 HBMQ6B0K9 141 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 GFRALQ6UXV0 394 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 WDR88Q6ZMY6 472 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 TMPRSS11FQ6ZWK6 438 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 HIST3H2AQ7L7L0 130 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 MAMDC2Q7Z304 686 aaPredicted RBP11.18□□□□□ -0.62
SNX17-208ENST00000493711 NRMQ8IXM6 262 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 C10orf53Q8N6V4 93 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 ATP6V1C2Q8NEY4 427 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 CPT1CQ8TCG5 803 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 LIPHQ8WWY8 451 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 SMPDL3BQ92485 455 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 HIST1H2ACQ93077 130 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 BPIFA2Q96DR5 249 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 SGTBQ96EQ0 304 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 OR5B2Q96R09 309 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 NPAS1Q99742 590 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 PKP2Q99959 881 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 ASPNQ9BXN1 380 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 NDEL1Q9GZM8 345 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 TMEM185BQ9H7F4 350 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 ZNF556Q9HAH1 456 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 RNPEPL1Q9HAU8 725 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 NTN4Q9HB63 628 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 ENOPH1Q9UHY7 261 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 ZNF229Q9UJW7 825 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 LIPGQ9Y5X9 500 aa11.18□□□□□ -0.62
SNX17-208ENST00000493711 ATMQ13315 3056 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 A0A1B0GTH9 108 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 LIPT2A6NK58 231 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 H0Y3Z8 333 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 EIF1AYO14602 144 aaKnown RBP11.17□□□□□ -0.62
SNX17-208ENST00000493711 FZD7O75084 574 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 SYNGR4O95473 234 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 ADAP00813 363 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 FCGR2AP12318 317 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 IFI30P13284 250 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 GABRA1P14867 456 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 ZNF23P17027 643 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 IL11P20809 199 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 FPR3P25089 353 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 SFTPDP35247 375 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 UGT2B15P54855 530 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 SLC34A1Q06495 639 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 COX10Q12887 443 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 MYBPHQ13203 477 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 C1orf94Q6P1W5 598 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 AMIGO2Q86SJ2 522 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 LURAP1LQ8IV03 231 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 SCAIQ8N9R8 606 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 ST6GALNAC3Q8NDV1 305 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 ADPRHL1Q8NDY3 354 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 OR10G2Q8NGC3 310 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 FAM57AQ8TBR7 257 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 ZPLD1Q8TCW7 415 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 GNPDA2Q8TDQ7 276 aa11.17□□□□□ -0.62
SNX17-208ENST00000493711 CPNE4Q96A23 557 aaPredicted RBP11.17□□□□□ -0.62
SNX17-208ENST00000493711 WDYHV1Q96HA8 205 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms