RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 GPALPP1Q8IXQ4 340 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 PLPP5Q8NEB5 264 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 MOSPD2Q8NHP6 518 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 LIPHQ8WWY8 451 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 HTRA1Q92743 480 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 ZMYND19Q96E35 227 aaPredicted RBP19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 DDOQ99489 341 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 DUSP23Q9BVJ7 150 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 C14orf119Q9NWQ9 140 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 SRPK3Q9UPE1 567 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 U3KQA8 63 aa19.27■□□□□ 0.67
CCDC88B-208ENST00000492980 C19orf67A6NJJ6 358 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 DVL2O14641 736 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 HOXA6P31267 233 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 PRPS1P60891 318 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 PLCXD2Q0VAA5 305 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 GGTLC2Q14390 218 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 ISXQ2M1V0 245 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 ZMAT1Q5H9K5 638 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 RHBDD2Q6NTF9 364 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 SSX6Q7RTT6 188 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 SLC29A4Q7RTT9 530 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 CADM3Q8N126 398 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 ZNF441Q8N8Z8 693 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 NPEPL1Q8NDH3 523 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 C4orf36Q96KX1 117 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 KLHL1Q9NR64 748 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 MPDZO75970 2070 aa19.26■□□□□ 0.67
CCDC88B-208ENST00000492980 CCDC163A0A0D9SF12 145 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 A0A1B0GTQ1 180 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 CPED1A4D0V7 1026 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 TFP02787 698 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 GRK6P43250 576 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 ERVK-25P63136 954 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 EGR4Q05215 589 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 NR0B2Q15466 257 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 DDI2Q5TDH0 399 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 PMS2CLQ68D20 193 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 MAMSTRQ6ZN01 415 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 SHISA6Q6ZSJ9 500 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 RFLNBQ8N5W9 214 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 FAM181AQ8N9Y4 354 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 MOGAT1Q96PD6 335 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 NMNAT3Q96T66 252 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 SRRQ9GZT4 340 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 MUTYHQ9UIF7 546 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 HIF3AQ9Y2N7 669 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 OR6C76A6NM76 312 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 J3QLW9 94 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 SPNP16150 400 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 ZNF19P17023 458 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 SLC6A8P48029 635 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 FOXL2P58012 376 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 OR12D2P58182 307 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 SQSTM1Q13501 440 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 VASH1Q7L8A9 365 aaPredicted RBP19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 OR51L1Q8NGJ5 315 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 ZNF563Q8TA94 476 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 ZPLD1Q8TCW7 415 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 SAP25Q8TEE9 199 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 RASD2Q96D21 266 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 OMA1Q96E52 524 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 CNN2Q99439 309 aaKnown RBP19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 TGIF2Q9GZN2 237 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 ADAM19Q9H013 955 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 MMP25Q9NPA2 562 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 FSCN3Q9NQT6 498 aa19.25■□□□□ 0.67
CCDC88B-208ENST00000492980 A0A1W2PQD3 144 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 IMPA2O14732 288 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 PLPP2O43688 288 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 IDH3BO43837 385 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 NCR1O76036 304 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 CD53P19397 219 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 TACR3P29371 465 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 AQP2P41181 271 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 DEFA1P59665 94 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 DEFA3P59666 94 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 E2F1Q01094 437 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 GLYR1Q49A26 553 aaPredicted RBP19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 LCN1P1Q5VSP4 162 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 ARL9Q6T311 187 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 RABEPKQ7Z6M1 372 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 MARCH3Q86UD3 253 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 OR8H2Q8N162 312 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 C10orf53Q8N6V4 93 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 LRRC75AQ8NAA5 344 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 POMGNT2Q8NAT1 580 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 ZNRF4Q8WWF5 429 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 NMNAT2Q9BZQ4 307 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 C12orf10Q9HB07 376 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 NOX1Q9Y5S8 564 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 A0A1W2PQM1 296 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 OR6C68A6NDL8 312 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 C17orf51A8MQB3 221 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 ALG1L2C9J202 215 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 HCRTR2O43614 444 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 DLGAP3O95886 979 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 ANKRD34CP0C6C1 535 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 ABCD3P28288 659 aa19.24■□□□□ 0.67
CCDC88B-208ENST00000492980 HCCSP53701 268 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms