RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 RLIMQ9NVW2 624 aa12.38□□□□□ -0.43
ATG3-206ENST00000492886 CALML5Q9NZT1 146 aa12.38□□□□□ -0.43
ATG3-206ENST00000492886 MAGED1Q9Y5V3 778 aaPredicted RBP12.38□□□□□ -0.43
ATG3-206ENST00000492886 SLC25A15Q9Y619 301 aa12.38□□□□□ -0.43
ATG3-206ENST00000492886 GMEB1Q9Y692 573 aa12.38□□□□□ -0.43
ATG3-206ENST00000492886 USH1CQ9Y6N9 552 aa12.38□□□□□ -0.43
ATG3-206ENST00000492886 HIVEP2P31629 2446 aa12.38□□□□□ -0.43
ATG3-206ENST00000492886 FAM234BA2RU67 622 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 LIPT2A6NK58 231 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 CLOCKO15516 846 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 NPIPB7O75200 414 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 MRPL33O75394 65 aaKnown RBP12.37□□□□□ -0.43
ATG3-206ENST00000492886 ERLIN1O75477 346 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 BCHEP06276 602 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 CCNA2P20248 432 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 CRISP3P54108 245 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 ATP5J2P56134 94 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 OR2B6P58173 313 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 KRTAP1-1Q07627 177 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 STK11Q15831 433 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 ZSWIM7Q19AV6 140 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 LIN52Q52LA3 116 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 PRAMEF8Q5VWM4 474 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 PRAMEF7Q5VXH5 474 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 CLIP4Q8N3C7 705 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 ZIC4Q8N9L1 334 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 SLC35B4Q969S0 331 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 TMEM19Q96HH6 336 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 PIF1Q9H611 641 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 RMND5AQ9H871 391 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 BCL2L10Q9HD36 194 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 ASB6Q9NWX5 421 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 THUMPD1Q9NXG2 353 aaKnown RBP12.37□□□□□ -0.43
ATG3-206ENST00000492886 TAS2R16Q9NYV7 291 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 DCTN4Q9UJW0 460 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 ZNF443Q9Y2A4 671 aaPredicted RBP12.37□□□□□ -0.43
ATG3-206ENST00000492886 PCDHB14Q9Y5E9 798 aa12.37□□□□□ -0.43
ATG3-206ENST00000492886 A0A0G2JPF8 293 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 TMEM229AB2RXF0 380 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 HNRNPCL2B2RXH8 293 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 HNRNPCL3B7ZW38 293 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 HNRNPCL1O60812 293 aaKnown RBP12.36□□□□□ -0.43
ATG3-206ENST00000492886 RAD51DO75771 328 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 TGDSO95455 350 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 IGHV3-9P01782 118 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 GKN3PP0CG01 181 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 HNRNPCL4P0DMR1 293 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 PRG2P13727 222 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 UQCRBP14927 111 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 CRATP43155 626 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 RGNQ15493 299 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 ETFDHQ16134 617 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 RPS26P11Q5JNZ5 115 aaPredicted RBP12.36□□□□□ -0.43
ATG3-206ENST00000492886 LRIF1Q5T3J3 769 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 C1QTNF12Q5T7M4 302 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 WBP2NLQ6ICG8 309 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 ALKBH2Q6NS38 261 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 FUNDC1Q8IVP5 155 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 MSRB3Q8IXL7 192 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 MIER2Q8N344 545 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 TMEM99Q8N816 258 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 WDR31Q8NA23 367 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 MUCL1Q96DR8 90 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 SF3B5Q9BWJ5 86 aaKnown RBP12.36□□□□□ -0.43
ATG3-206ENST00000492886 SPATA9Q9BWV2 254 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 A4GALTQ9NPC4 353 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 SLC7A10Q9NS82 523 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 SLC9A8Q9Y2E8 581 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 ARFGEF3Q5TH69 2177 aa12.36□□□□□ -0.43
ATG3-206ENST00000492886 CHD3Q12873 2000 aaKnown RBP12.35□□□□□ -0.43
ATG3-206ENST00000492886 TRBV5-3A0A0A0MS03 114 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 ABCD4O14678 606 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 NUDT7P0C024 238 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 IDUAP35475 653 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 FAPQ12884 760 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 FADDQ13158 208 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 TNK1Q13470 666 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 TSPO2Q5TGU0 170 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 OR7E24Q6IFN5 339 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 C11orf71Q6IPW1 123 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 C17orf78Q8N4C9 275 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 C1orf162Q8NEQ5 155 aaPredicted RBP12.35□□□□□ -0.43
ATG3-206ENST00000492886 OR52E4Q8NGH9 312 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 C3orf49Q96BT1 292 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 TRMT61AQ96FX7 289 aaKnown RBP12.35□□□□□ -0.43
ATG3-206ENST00000492886 RADILQ96JH8 1075 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 NAA11Q9BSU3 229 aaPredicted RBP12.35□□□□□ -0.43
ATG3-206ENST00000492886 PARPBPQ9NWS1 579 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 SLC25A37Q9NYZ2 338 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 CISD1Q9NZ45 108 aaKnown RBP12.35□□□□□ -0.43
ATG3-206ENST00000492886 MGAT4BQ9UQ53 548 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 IFT52Q9Y366 437 aa12.35□□□□□ -0.43
ATG3-206ENST00000492886 JMJD1CQ15652 2540 aa12.34□□□□□ -0.43
ATG3-206ENST00000492886 ABCA1O95477 2261 aa12.34□□□□□ -0.43
ATG3-206ENST00000492886 A0A096LPI6 279 aa12.34□□□□□ -0.43
ATG3-206ENST00000492886 A0A1W2PP18 115 aa12.34□□□□□ -0.43
ATG3-206ENST00000492886 A8MVM7 634 aa12.34□□□□□ -0.43
ATG3-206ENST00000492886 FTCDNL1E5RQL4 147 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms