RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TFAP2EQ6VUC0 442 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 HACD2Q6Y1H2 254 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 GALNT5Q7Z7M9 940 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 TMEM200AQ86VY9 491 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 SMYD1Q8NB12 490 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 ELOA3Q8NG57 546 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 LINC01560Q8TB33 94 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 SLC26A7Q8TE54 656 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 MS4A3Q96HJ5 214 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 ZNF583Q96ND8 569 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 ARHGDIGQ99819 225 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 HOPXQ9BPY8 73 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 GPATCH1Q9BRR8 931 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 TAPBPLQ9BX59 468 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 OR10A4Q9H209 315 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 C12orf49Q9H741 205 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 EFCAB1Q9HAE3 211 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 TMEM27Q9HBJ8 222 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 SELENONQ9NZV5 590 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 TESMINQ9Y4I5 508 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 ADGRG4Q8IZF6 3080 aa9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 ANKHD1Q8IWZ3 2542 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-206ENST00000492796 CACNA1DQ01668 2161 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 ANKRD17O75179 2603 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 A0A0B4J2E0 115 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 A0A1B0GWA3 101 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 A0A1B0GX12 115 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 FAM221AA4D161 298 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 LIPT2A6NK58 231 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 A6NNC1 897 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 ZNF716A6NP11 495 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 NDUFAB1O14561 156 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 AIM2O14862 343 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 CTAG2O75638 210 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 AHSA1O95433 338 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 IFNA14P01570 189 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 PPP3CBP16298 524 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 KLK2P20151 261 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 CD247P20963 164 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 FPR1P21462 350 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 CCKARP32238 428 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 OR3A2P47893 321 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 HOXC5Q00444 222 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 DUSP7Q16829 419 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 EXOC3L2Q2M3D2 409 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 C1orf140Q5VVS0 124 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 NUFIP2Q7Z417 695 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 PIGWQ7Z7B1 504 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 TREML1Q86YW5 311 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 OR2T12Q8NG77 320 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 GPR32P1Q8NGA4 272 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 TAMM41Q96BW9 452 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 DNAJA3Q96EY1 480 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 SLC47A1Q96FL8 570 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 ZNF300Q96RE9 604 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 PIF1Q9H611 641 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 ZNF226Q9NYT6 803 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 BAG5Q9UL15 447 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 ARL2BPQ9Y2Y0 163 aa9.47□□□□□ -0.89
CDC42SE1-206ENST00000492796 ELOVL7A1L3X0 281 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 AQP7P3A6NL99 342 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 M0R3H8 397 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 CASKO14936 926 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 OR2T1O43869 369 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 FZD7O75084 574 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 DCTN3O75935 186 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 VAMP5O95183 116 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 CNOT4O95628 575 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 PSMB1P20618 241 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 GTF2E2P29084 291 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 NUDT2P50583 147 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 BNIP2Q12982 314 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 CEACAM7Q14002 265 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 P2RY6Q15077 328 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 OR1Q1Q15612 314 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 OR7A5Q15622 319 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 OTUD3Q5T2D3 398 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 C8orf82Q6P1X6 216 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 ZNF613Q6PF04 617 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 STAC2Q6ZMT1 411 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 Q6ZT83 130 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 MICU2Q8IYU8 434 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 GABRG1Q8N1C3 465 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 OR6T1Q8NGN1 323 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 MFSD8Q8NHS3 518 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 SLC38A4Q969I6 547 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 MCHR1Q99705 422 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 MED18Q9BUE0 208 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 SF3B5Q9BWJ5 86 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 HDHD5Q9BXW7 423 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 KLHL4Q9C0H6 718 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 RASSF1Q9NS23 344 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 CMTM6Q9NX76 183 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 SLC9A8Q9Y2E8 581 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 GPR52Q9Y2T5 361 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 NOSIPQ9Y314 301 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 ITPR2Q14571 2701 aa9.46□□□□□ -0.9
CDC42SE1-206ENST00000492796 MPDZO75970 2070 aa9.45□□□□□ -0.9
CDC42SE1-206ENST00000492796 A0A087WUJ7 227 aa9.45□□□□□ -0.9
CDC42SE1-206ENST00000492796 CCT8L1PA6NM43 557 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms