RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SLA2Q9H6Q3 261 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 DEPPQ9NTK1 212 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 TAS2R7Q9NYW3 318 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 STUB1Q9UNE7 303 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 A0A0G2JMM0 328 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 C2orf92A0A1B0GVN3 265 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 A0A1W2PPB8 328 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 A0A1W2PRS3 328 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 PINLYPA6NC86 204 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 CCDC182A6NF36 153 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 PRAMEF25A6NGN4 478 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 OR6C76A6NM76 312 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 KIR3DP1A8MWS1 328 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 CDK2AP1O14519 115 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 AP3D1O14617 1153 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 ZIC2O95409 532 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 ADAP00813 363 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 GASTP01350 101 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 POU1F1P28069 291 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 CHI3L1P36222 383 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 EMDP50402 254 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 NR0B1P51843 470 aaKnown RBP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 TDGF1P3P51864 188 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 CASP9P55211 416 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SNRPGP62308 76 aaKnown RBP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 GANABQ14697 944 aaKnown RBP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 ZNF79Q15937 498 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 BAK1Q16611 211 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 ZNF791Q3KP31 576 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 RNFT1Q5M7Z0 435 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 FHL5Q5TD97 284 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 FAM180AQ6UWF9 173 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 IKBIPQ70UQ0 350 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SLC30A8Q8IWU4 369 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SULF2Q8IWU5 870 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 LAX1Q8IWV1 398 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SLC34A3Q8N130 599 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 OR7G2Q8NG99 324 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 OR7G1Q8NGA0 311 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 OR52R1Q8NGF1 315 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 CIDECQ96AQ7 238 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 TMEM80Q96HE8 168 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 C5orf34Q96MH7 638 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 BARHL1Q9BZE3 327 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SRRQ9GZT4 340 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 GLIPR2Q9H4G4 154 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 NMNAT1Q9HAN9 279 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SLC25A19Q9HC21 320 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 MIEF1Q9NQG6 463 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SNTG1Q9NSN8 517 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 HPF1Q9NWY4 346 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 SSR3Q9UNL2 185 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 CMAHPQ9Y471 501 aa8.58□□□□□ -1.04
BRCA1-219ENST00000491747 A0A1W2PQ09 198 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 TFECO14948 347 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 C6orf47O95873 294 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 AZGP1P25311 298 aaKnown RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 GPR85P60893 370 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 ASAH1Q13510 395 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 PDE7AQ13946 482 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 HORMAD2Q8N7B1 307 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 TMEM178AQ8NBL3 297 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 PSD4Q8NDX1 1056 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 VANGL1Q8TAA9 524 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 PPCDCQ96CD2 204 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 DMRTB1Q96MA1 342 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 FRMD6Q96NE9 622 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 AMDHD1Q96NU7 426 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 BBS4Q96RK4 519 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 IL4I1Q96RQ9 567 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 POLR2J2Q9GZM3 115 aaKnown RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 NXF5Q9H1B4 397 aaKnown RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 NDUFB11Q9NX14 153 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 PAQR5Q9NXK6 330 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 TMCC3Q9ULS5 477 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 ENTPD4Q9Y227 616 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 LSM2Q9Y333 95 aaKnown RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 RPL36Q9Y3U8 105 aaKnown RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 DSPPQ9NZW4 1301 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 NBASA2RRP1 2371 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 G3V3Y1 287 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 ENTPD6O75354 484 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 ALX3O95076 343 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 ADRA2AP08913 450 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 CCL3P10147 92 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 OSMP13725 252 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 MPIP34949 423 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 RFC3P40938 356 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 CRYBB2P43320 205 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 NCBP2P52298 156 aaKnown RBP eCLIP8.57□□□□□ -1.045e-10■■■■■ 33.9
BRCA1-219ENST00000491747 PCBP3P57721 371 aaKnown RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 MLLT11Q13015 90 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 NNATQ16517 81 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 EIF2S3LQ2VIR3 472 aaKnown RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 CYP27C1Q4G0S4 372 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 ZMAT1Q5H9K5 638 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 TMEM201Q5SNT2 666 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 PDZK1Q5T2W1 519 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 OPN5Q6U736 354 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 FAM131AQ6UXB0 335 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms