RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 GTPBP3Q969Y2 492 aaKnown RBP7.29□□□□□ -1.24
LSM2-213ENST00000491421 TMEM19Q96HH6 336 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 C7orf26Q96N11 449 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 TRIM2Q9C040 744 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 ADAM19Q9H013 955 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 RAD21L1Q9H4I0 556 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 ARMC7Q9H6L4 198 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 TCF7L2Q9NQB0 619 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 PARPBPQ9NWS1 579 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 ASB6Q9NWX5 421 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 TAS2R16Q9NYV7 291 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 MALT1Q9UDY8 824 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 ZNF232Q9UNY5 417 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 ZNF443Q9Y2A4 671 aaPredicted RBP7.29□□□□□ -1.24
LSM2-213ENST00000491421 SLC9A8Q9Y2E8 581 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 A0A0G2JPF8 293 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 LIPT2A6NK58 231 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 HNRNPCL2B2RXH8 293 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 HNRNPCL3B7ZW38 293 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 ABCD4O14678 606 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 HNRNPCL1O60812 293 aaKnown RBP7.28□□□□□ -1.24
LSM2-213ENST00000491421 TGDSO95455 350 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 LY6G6DO95868 133 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 THBS1P07996 1170 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 SOD3P08294 240 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 DANCRP0C864 163 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 HNRNPCL4P0DMR1 293 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 PRG2P13727 222 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 NCF2P19878 526 aaPredicted RBP7.28□□□□□ -1.24
LSM2-213ENST00000491421 NTF4P34130 210 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 ACAA2P42765 397 aaKnown RBP7.28□□□□□ -1.24
LSM2-213ENST00000491421 IDH3AP50213 366 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 CDH11P55287 796 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 FAPQ12884 760 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 CEACAM7Q14002 265 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 SLC17A1Q14916 467 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 RGNQ15493 299 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 OR7A5Q15622 319 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 ZSWIM7Q19AV6 140 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 OTUD3Q5T2D3 398 aaPredicted RBP7.28□□□□□ -1.24
LSM2-213ENST00000491421 WBP2NLQ6ICG8 309 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 OR7E24Q6IFN5 339 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 PAQR6Q6TCH4 344 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 KLHL17Q6TDP4 642 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 TMEM108Q6UXF1 575 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 CLIP4Q8N3C7 705 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 GOLGA6L1Q8N7Z2 621 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 OR52E4Q8NGH9 312 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 OR52N5Q8NH56 324 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 GTF2H4Q92759 462 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 TRMT61AQ96FX7 289 aaKnown RBP7.28□□□□□ -1.24
LSM2-213ENST00000491421 SPATA9Q9BWV2 254 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 TAPBPLQ9BX59 468 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 PAIP1Q9H074 479 aaKnown RBP7.28□□□□□ -1.24
LSM2-213ENST00000491421 A4GALTQ9NPC4 353 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 FAIMQ9NVQ4 179 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 NPAP1Q9NZP6 1156 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 UPB1Q9UBR1 384 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 PRDM4Q9UKN5 801 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 IFT52Q9Y366 437 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 PCDHB14Q9Y5E9 798 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 MAGED1Q9Y5V3 778 aaPredicted RBP7.28□□□□□ -1.24
LSM2-213ENST00000491421 FLVCR1Q9Y5Y0 555 aa7.28□□□□□ -1.24
LSM2-213ENST00000491421 NSD1Q96L73 2696 aaPredicted RBP7.28□□□□□ -1.24
LSM2-213ENST00000491421 A0A096LPI6 279 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 A0A1W2PR80 420 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 AQP7P3A6NL99 342 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 A8MVM7 634 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 SHISA9B4DS77 424 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 C5orf58C9J3I9 102 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 OVOL3O00110 214 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 CLIC1O00299 241 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 NR5A2O00482 541 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 AKR7A3O95154 331 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 ITGA5P08648 1049 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 NUDT7P0C024 238 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 PTAFRP25105 342 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 CDKN1AP38936 164 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 MRPL19P49406 292 aaKnown RBP7.27□□□□□ -1.25
LSM2-213ENST00000491421 ZNF83P51522 516 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 AQP5P55064 265 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 FOXG1P55316 489 aaPredicted RBP7.27□□□□□ -1.25
LSM2-213ENST00000491421 TGFBR3Q03167 851 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 BNIP2Q12982 314 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 FADDQ13158 208 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 VEZF1Q14119 521 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 ETFDHQ16134 617 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 TUSC1Q2TAM9 212 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 PGGHGQ32M88 737 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 ZNF311Q5JNZ3 666 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 C9orf135Q5VTT2 229 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 C1orf140Q5VVS0 124 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 PRAMEF8Q5VWM4 474 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 PRAMEF7Q5VXH5 474 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 SLC22A25Q6T423 547 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 SERPINA11Q86U17 422 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 TMEM99Q8N816 258 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 OR9K2Q8NGE7 335 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 BBS10Q8TAM1 723 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 DYDC1Q8WWB3 177 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms