RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 THUMPD1Q9NXG2 353 aaKnown RBP15.87■□□□□ 0.13
HMGN1-219ENST00000491183 NPAP1Q9NZP6 1156 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 PRDM4Q9UKN5 801 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 ZNF232Q9UNY5 417 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 FLVCR1Q9Y5Y0 555 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 TRIM64A6NGJ6 449 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 TRIM64BA6NI03 449 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 POLR3GO15318 223 aaPredicted RBP15.86■□□□□ 0.13
HMGN1-219ENST00000491183 TMCC2O75069 709 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 SOD3P08294 240 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 DANCRP0C864 163 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 CXCR1P25024 350 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 FAPQ12884 760 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 BNIP2Q12982 314 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 CEACAM7Q14002 265 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 LARS2Q15031 903 aaKnown RBP15.86■□□□□ 0.13
HMGN1-219ENST00000491183 ZNF672Q499Z4 452 aaPredicted RBP15.86■□□□□ 0.13
HMGN1-219ENST00000491183 PAGE3Q5JUK9 113 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 WBP2NLQ6ICG8 309 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 PAQR6Q6TCH4 344 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 SERPINA11Q86U17 422 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 P2RY8Q86VZ1 359 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 MSRB3Q8IXL7 192 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 C10orf111Q8N326 155 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 CADM2Q8N3J6 435 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 TMEM99Q8N816 258 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 OR52E4Q8NGH9 312 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 MUCL1Q96DR8 90 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 COX4I2Q96KJ9 171 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 BCL2L10Q9HD36 194 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 A4GALTQ9NPC4 353 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 ASB6Q9NWX5 421 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 LAMP3Q9UQV4 416 aa15.86■□□□□ 0.13
HMGN1-219ENST00000491183 LIPT2A6NK58 231 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 OVOL3O00110 214 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 PDLIM1O00151 329 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 RAD51DO75771 328 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 IDUAP35475 653 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 AQP5P55064 265 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 STX1BP61266 288 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 LTBQ06643 244 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 GABRA6Q16445 453 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 ZSWIM7Q19AV6 140 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 KRTAP21-3Q3LHN1 58 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 OTUD3Q5T2D3 398 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-219ENST00000491183 LRIF1Q5T3J3 769 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 CLEC9AQ6UXN8 241 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 ZIC4Q8N9L1 334 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 SMAP2Q8WU79 429 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-219ENST00000491183 FBXW5Q969U6 566 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 MUS81Q96NY9 551 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 BDH2Q9BUT1 245 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 TRIM2Q9C040 744 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 CXorf56Q9H5V9 222 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 SLC7A10Q9NS82 523 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 CCDC167Q9P0B6 97 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 MALT1Q9UDY8 824 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 IFT52Q9Y366 437 aa15.85■□□□□ 0.13
HMGN1-219ENST00000491183 CIB4A0PJX0 185 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 TMEM247A6NEH6 219 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 CCT8L1PA6NM43 557 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 SHISA9B4DS77 424 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 AKR7A3O95154 331 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 LY6G6DO95868 133 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 GPIP06744 558 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 ITGA5P08648 1049 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 COPZ1P61923 177 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 RPS4XP62701 263 aaKnown RBP15.84■□□□□ 0.13
HMGN1-219ENST00000491183 HOXC5Q00444 222 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 FADDQ13158 208 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 OR7A5Q15622 319 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 PGGHGQ32M88 737 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 ZNF311Q5JNZ3 666 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 TSPO2Q5TGU0 170 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 PRAMEF8Q5VWM4 474 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 PRAMEF7Q5VXH5 474 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 CASP12Q6UXS9 341 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 GOLGA6L1Q8N7Z2 621 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 OR52N5Q8NH56 324 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 SPDL1Q96EA4 605 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 RAD21L1Q9H4I0 556 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 TAS2R16Q9NYV7 291 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 VAPAQ9P0L0 249 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 SLC9A8Q9Y2E8 581 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 SLC25A15Q9Y619 301 aa15.84■□□□□ 0.13
HMGN1-219ENST00000491183 NIPBLQ6KC79 2804 aaeCLIP15.83■□□□□ 0.13
HMGN1-219ENST00000491183 TRBV5-3A0A0A0MS03 114 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 A0A1W2PR80 420 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 A8MVM7 634 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 NR5A2O00482 541 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 FRS3O43559 492 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 NPIPB7O75200 414 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 NCF2P19878 526 aaPredicted RBP15.83■□□□□ 0.12
HMGN1-219ENST00000491183 P2RY4P51582 365 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 ATP5J2P56134 94 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 SSX8Q7RTT4 187 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 BBS10Q8TAM1 723 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 C3orf49Q96BT1 292 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 ZNF385AQ96PM9 386 aaKnown RBP15.83■□□□□ 0.12
HMGN1-219ENST00000491183 IKZF5Q9H5V7 419 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms