RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TRDV1A0A1B0GX56 115 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 CASKO14936 926 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 ELAVL1Q15717 326 aaKnown RBP20.84■□□□□ 0.93
USF3-203ENST00000491165 TMEM44Q2T9K0 475 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 ZFP41Q8N8Y5 198 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 ZNF485Q8NCK3 441 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 NUP43Q8NFH3 380 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 OSTF1Q92882 214 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 TEX12Q9BXU0 123 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 EQTNQ9NQ60 294 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 LIPT1Q9Y234 373 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 DTX4Q9Y2E6 619 aa20.84■□□□□ 0.93
USF3-203ENST00000491165 NCOR2Q9Y618 2525 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 B4DXG7 233 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 MASP2O00187 686 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 PLOD3O60568 738 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 DDAH2O95865 285 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 MYL9P24844 172 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 CD79BP40259 229 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 FOLR3P41439 243 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 LCN1P1Q5VSP4 162 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 LHFPL3Q86UP9 236 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 ATP6V1C2Q8NEY4 427 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 METTL21AQ8WXB1 218 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 NXPE2Q96DL1 559 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 NTMQ9P121 344 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 COMMD3Q9UBI1 195 aa20.83■□□□□ 0.93
USF3-203ENST00000491165 LIPCP11150 499 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 CAV3P56539 151 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 ENKURQ8TC29 256 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 SLC7A6Q92536 515 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 ZG16BQ96DA0 208 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 SENP5Q96HI0 755 aaPredicted RBP20.83■□□□□ 0.92
USF3-203ENST00000491165 FRMD6Q96NE9 622 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 COQ7Q99807 217 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 RNF121Q9H920 327 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 KLHL28Q9NXS3 571 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 C19orf53Q9UNZ5 99 aaPredicted RBP20.83■□□□□ 0.92
USF3-203ENST00000491165 CLCA3PQ9Y6N3 262 aa20.83■□□□□ 0.92
USF3-203ENST00000491165 C21orf140B9A014 251 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 SURF4O15260 269 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 FPR3P25089 353 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 TRHRP34981 398 aaPredicted RBP20.82■□□□□ 0.92
USF3-203ENST00000491165 RPS15P62841 145 aaKnown RBP20.82■□□□□ 0.92
USF3-203ENST00000491165 FUT7Q11130 342 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 CDK10Q15131 360 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 C6orf183Q5T699 404 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 SLC30A6Q6NXT4 461 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 KIRREL2Q6UWL6 708 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 C16orf62Q7Z3J2 963 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 CPEB2Q7Z5Q1 589 aaKnown RBP20.82■□□□□ 0.92
USF3-203ENST00000491165 VASH2Q86V25 355 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 ASCC1Q8N9N2 400 aaKnown RBP20.82■□□□□ 0.92
USF3-203ENST00000491165 OR52R1Q8NGF1 315 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 SLC2A12Q8TD20 617 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 ZNF721Q8TF20 911 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 OR8D2Q9GZM6 311 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 WDR70Q9NW82 654 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 PTGFRNQ9P2B2 879 aa20.82■□□□□ 0.92
USF3-203ENST00000491165 TTC36A6NLP5 189 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 SOCS6O14544 535 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 PLA2G10O15496 165 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 HCN1O60741 890 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 NTN1O95631 604 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 CH25HO95992 272 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 IGKV3-11P04433 115 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 PRKAR1BP31321 381 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 GALNSP34059 522 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 GPR143P51810 404 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 BIKQ13323 160 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 AADACL4Q5VUY2 407 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 OR4F15Q8NGB8 312 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 OR4Q3Q8NH05 313 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 ACOT11Q8WXI4 607 aaPredicted RBP20.81■□□□□ 0.92
USF3-203ENST00000491165 TRIM45Q9H8W5 580 aaPredicted RBP20.81■□□□□ 0.92
USF3-203ENST00000491165 MGAQ8IWI9 3026 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 A0A087WV62 115 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 LOC102723996A0A087X1L8 192 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 AKAP8O43823 692 aaKnown RBP20.81■□□□□ 0.92
USF3-203ENST00000491165 PRKNO60260 465 aaPredicted RBP20.81■□□□□ 0.92
USF3-203ENST00000491165 LALBAP00709 142 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 KIR2DL3P43628 341 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 QPRTQ15274 297 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 DECR1Q16698 335 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 PAPD4Q6PIY7 484 aaKnown RBP20.81■□□□□ 0.92
USF3-203ENST00000491165 PLEKHM3Q6ZWE6 761 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 PPP1R32Q7Z5V6 425 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 KLHL36Q8N4N3 616 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 ZNF615Q8N8J6 731 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 TMED9Q9BVK6 235 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 GPR87Q9BY21 358 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 MED17Q9NVC6 651 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 MSRB2Q9Y3D2 182 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 CHST2Q9Y4C5 530 aa20.81■□□□□ 0.92
USF3-203ENST00000491165 APC2O95996 2303 aa20.8■□□□□ 0.92
USF3-203ENST00000491165 HLA-DPB1P04440 258 aa20.8■□□□□ 0.92
USF3-203ENST00000491165 SLC2A2P11168 524 aaPredicted RBP20.8■□□□□ 0.92
USF3-203ENST00000491165 LIFP15018 202 aa20.8■□□□□ 0.92
USF3-203ENST00000491165 EMDP50402 254 aa20.8■□□□□ 0.92
USF3-203ENST00000491165 RGS8P57771 180 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms