RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ARID1AO14497 2285 aa27.71■■■□□ 2.03
LDB1-204ENST00000490751 HS3ST1O14792 307 aa27.7■■■□□ 2.02
LDB1-204ENST00000490751 MRPL33O75394 65 aaKnown RBP27.7■■■□□ 2.02
LDB1-204ENST00000490751 PGM3O95394 542 aa27.7■■■□□ 2.02
LDB1-204ENST00000490751 FOSL1P15407 271 aa27.7■■■□□ 2.02
LDB1-204ENST00000490751 ADSLP30566 484 aaPredicted RBP27.7■■■□□ 2.02
LDB1-204ENST00000490751 GCNT6Q5T4J0 391 aa27.7■■■□□ 2.02
LDB1-204ENST00000490751 ATG4DQ86TL0 474 aaPredicted RBP27.7■■■□□ 2.02
LDB1-204ENST00000490751 C10orf111Q8N326 155 aa27.7■■■□□ 2.02
LDB1-204ENST00000490751 AKAP1Q92667 903 aaKnown RBP eCLIP27.7■■■□□ 2.02
LDB1-204ENST00000490751 FRS3O43559 492 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 ARAFP10398 606 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 GGT1P19440 569 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 PPIBP23284 216 aaKnown RBP27.69■■■□□ 2.02
LDB1-204ENST00000490751 BNIP2Q12982 314 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 CEACAM7Q14002 265 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 PAQR6Q6TCH4 344 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 ZNF433Q8N7K0 673 aaPredicted RBP27.69■■■□□ 2.02
LDB1-204ENST00000490751 ZNF611Q8N823 705 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 NFKBIDQ8NI38 313 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 IGFBPL1Q8WX77 278 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 PERPQ96FX8 193 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 FLVCR1Q9Y5Y0 555 aa27.69■■■□□ 2.02
LDB1-204ENST00000490751 TRBV5-3A0A0A0MS03 114 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 LIPT2A6NK58 231 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 CLOCKO15516 846 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 GPIP06744 558 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 CD3EP07766 207 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 PPA1Q15181 289 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 OR7A5Q15622 319 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 TIMM23BQ5SRD1 257 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 OTUD3Q5T2D3 398 aaPredicted RBP27.68■■■□□ 2.02
LDB1-204ENST00000490751 CASP12Q6UXS9 341 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 STON2Q8WXE9 905 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 C3orf49Q96BT1 292 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 SLC9A8Q9Y2E8 581 aa27.68■■■□□ 2.02
LDB1-204ENST00000490751 A0A1W2PP18 115 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 A8MVM7 634 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 ETS2P15036 469 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 SLC17A1Q14916 467 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 TMEM99Q8N816 258 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 TMEM171Q8WVE6 324 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 MUCL1Q96DR8 90 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 RABEP2Q9H5N1 569 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 IKZF5Q9H5V7 419 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 ASB6Q9NWX5 421 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 MALT1Q9UDY8 824 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 NIPSNAP3AQ9UFN0 247 aaPredicted RBP27.67■■■□□ 2.02
LDB1-204ENST00000490751 GMEB1Q9Y692 573 aa27.67■■■□□ 2.02
LDB1-204ENST00000490751 SETD2Q9BYW2 2564 aaPredicted RBP27.67■■■□□ 2.02
LDB1-204ENST00000490751 RAD51DO75771 328 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 SASH3O75995 380 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 AKR7A3O95154 331 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 HOXC5Q00444 222 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 CDK6Q00534 326 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 BSPH1Q075Z2 132 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 FAPQ12884 760 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 ADAM5Q6NVV9 412 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 LILRB1Q8NHL6 650 aaPredicted RBP27.66■■■□□ 2.02
LDB1-204ENST00000490751 SLC35B4Q969S0 331 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 TAPBPLQ9BX59 468 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 GSX1Q9H4S2 264 aaPredicted RBP27.66■■■□□ 2.02
LDB1-204ENST00000490751 DCTN4Q9UJW0 460 aa27.66■■■□□ 2.02
LDB1-204ENST00000490751 CIB4A0PJX0 185 aa27.65■■■□□ 2.02
LDB1-204ENST00000490751 DPRXA6NFQ7 191 aa27.65■■■□□ 2.02
LDB1-204ENST00000490751 OR5H1A6NKK0 313 aa27.65■■■□□ 2.02
LDB1-204ENST00000490751 P2RY8Q86VZ1 359 aa27.65■■■□□ 2.02
LDB1-204ENST00000490751 RSPO3Q9BXY4 272 aaPredicted RBP27.65■■■□□ 2.02
LDB1-204ENST00000490751 GSX2Q9BZM3 304 aa27.65■■■□□ 2.02
LDB1-204ENST00000490751 NPHS2Q9NP85 383 aa27.65■■■□□ 2.02
LDB1-204ENST00000490751 PARPBPQ9NWS1 579 aa27.65■■■□□ 2.02
LDB1-204ENST00000490751 TAS2R16Q9NYV7 291 aa27.65■■■□□ 2.02
LDB1-204ENST00000490751 CCT8L1PA6NM43 557 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 TMEM229AB2RXF0 380 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 EDF1O60869 148 aaKnown RBP27.64■■■□□ 2.02
LDB1-204ENST00000490751 PRKAR1BP31321 381 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 PTH2RP49190 550 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 FOXG1P55316 489 aaPredicted RBP27.64■■■□□ 2.02
LDB1-204ENST00000490751 C1orf140Q5VVS0 124 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 REEP3Q6NUK4 255 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 SSX8Q7RTT4 187 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 YTHDF3Q7Z739 585 aaKnown RBP27.64■■■□□ 2.02
LDB1-204ENST00000490751 KBTBD8Q8NFY9 601 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 OR52E4Q8NGH9 312 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 C18orf12Q96KH6 178 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 ADPRHL2Q9NX46 363 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 CORO2BQ9UQ03 480 aa27.64■■■□□ 2.02
LDB1-204ENST00000490751 AQP7P3A6NL99 342 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 EVPLLA8MZ36 301 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 GPX2P18283 190 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 PRSS57Q6UWY2 283 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 DLEU7Q6UYE1 221 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 KRT73Q86Y46 540 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 OR9K2Q8NGE7 335 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 NEUROG1Q92886 237 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 FBXW5Q969U6 566 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 CPPED1Q9BRF8 314 aaPredicted RBP27.63■■■□□ 2.01
LDB1-204ENST00000490751 SF3B5Q9BWJ5 86 aaKnown RBP27.63■■■□□ 2.01
LDB1-204ENST00000490751 CXorf56Q9H5V9 222 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 ZNF385DQ9H6B1 395 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms