RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ZNF704Q6ZNC4 412 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 DNM1P46Q6ZS02 220 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 TRMT10CQ7L0Y3 403 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 GALNT10Q86SR1 603 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 TRABD2AQ86V40 505 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 MISPQ8IVT2 679 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 WDR75Q8IWA0 830 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 CNPY4Q8N129 248 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 GABRG1Q8N1C3 465 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 CCNYL1Q8N7R7 359 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 OR6Y1Q8NGX8 325 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 OR2V1Q8NHB1 315 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 CEP70Q8NHQ1 597 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 SPATA3Q8NHX4 192 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 GPR151Q8TDV0 419 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 ANP32BQ92688 251 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 ZNF524Q96C55 264 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 CCDC126Q96EE4 140 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 ZC3HAV1LQ96H79 300 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 C1orf43Q9BWL3 253 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 HDHD5Q9BXW7 423 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 TBL1XR1Q9BZK7 514 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 ACTR6Q9GZN1 396 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 TUBB1Q9H4B7 451 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 MIEF1Q9NQG6 463 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 RRAGDQ9NQL2 400 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 UBQLN4Q9NRR5 601 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 ACSS1Q9NUB1 689 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 C1orf109Q9NX04 203 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 GIN1Q9NXP7 522 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 SENP1Q9P0U3 644 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 MCTS1Q9ULC4 181 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 CLEC4AQ9UMR7 237 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 VDAC3Q9Y277 283 aa5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 POLR3HQ9Y535 204 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-210ENST00000489741 NPIPB9F8W1W9 429 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 SLC28A1O00337 649 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 TNFSF11O14788 317 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 MPPED1O15442 326 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 PLIN3O60664 434 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 SEC22BO75396 215 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 NTN1O95631 604 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 CD8AP01732 235 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 CHRM2P08172 466 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 SOD3P08294 240 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 MYL2P10916 166 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 SDC1P18827 310 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 SHC1P29353 583 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 AGTR1P30556 359 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 CTBP2P56545 445 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 CARD18P57730 90 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 HSPB3Q12988 150 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 MLC1Q15049 377 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 CD226Q15762 336 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 DUSP5Q16690 384 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 IMPG1Q17R60 797 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 UGT3A2Q3SY77 523 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 FAM153CQ494X1 144 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 RFTN2Q52LD8 501 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 KLHL26Q53HC5 615 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 SLC25A53Q5H9E4 307 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 ZNF362Q5T0B9 420 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 NCMAPQ5T1S8 102 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 AP1ARQ63HQ0 302 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 HBMQ6B0K9 141 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 TFAP2EQ6VUC0 442 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 NUFIP2Q7Z417 695 aaKnown RBP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 PEG10Q86TG7 708 aaKnown RBP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 MNS1Q8NEH6 495 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 STEAP2Q8NFT2 490 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 OR2T11Q8NH01 316 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 PSMA8Q8TAA3 256 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 RAB3IL1Q8TBN0 382 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 RNF128Q8TEB7 428 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 TMEM171Q8WVE6 324 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 HSD17B8Q92506 261 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 AKAP1Q92667 903 aaKnown RBP eCLIP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 CIDECQ96AQ7 238 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 ZBED6CLQ96FA7 236 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 C16orf58Q96GQ5 468 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 RNF145Q96MT1 663 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 CCT7Q99832 543 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 CXorf56Q9H5V9 222 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 REEP4Q9H6H4 257 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 DUSP22Q9NRW4 184 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 SIRT3Q9NTG7 399 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 PSMC3IPQ9P2W1 217 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 BAIAP2L1Q9UHR4 511 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 ATP6V1HQ9UI12 483 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 PTGDR2Q9Y5Y4 395 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 RAI1Q7Z5J4 1906 aaPredicted RBP5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 CADP27708 2225 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 ABCA1O95477 2261 aa5.63□□□□□ -1.51
PRPF40A-210ENST00000489741 DSCAMO60469 2012 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 hCG_2014768A0A024R1R8 64 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 GOLGA8QA0A0J9YX86 632 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 GOLGA8OA6NCC3 632 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 DPRXA6NFQ7 191 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ZNF814B7Z6K7 855 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 F5H697 171 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms