RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 DAZAP2Q15038 168 aaPredicted RBP15.43■□□□□ 0.06
MDC1-206ENST00000489540 OR1Q1Q15612 314 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 EXOC3L2Q2M3D2 409 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 ELOA3BQ3SY89 546 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 C1orf140Q5VVS0 124 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 ABLIM2Q6H8Q1 611 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 PAQR6Q6TCH4 344 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 NUFIP2Q7Z417 695 aaKnown RBP15.43■□□□□ 0.06
MDC1-206ENST00000489540 SLC15A3Q8IY34 581 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 ELOA3Q8NG57 546 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 OR2T12Q8NG77 320 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 GPR32P1Q8NGA4 272 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 TAMM41Q96BW9 452 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 DNAJA3Q96EY1 480 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 SLC47A1Q96FL8 570 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 ARHGDIGQ99819 225 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 TAPBPLQ9BX59 468 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 C12orf49Q9H741 205 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 CMTM6Q9NX76 183 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 ELOVL7A1L3X0 281 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 CCT8L1PA6NM43 557 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 TMEM229AB2RXF0 380 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 NPIPB7O75200 414 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 CD247P20963 164 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 CEACAM7Q14002 265 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 NRF1Q16656 503 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 ALG10BQ5I7T1 473 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 C5orf46Q6UWT4 87 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 GALNT5Q7Z7M9 940 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 LRRC37BQ96QE4 947 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 PRR14Q9BWN1 585 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 BAG5Q9UL15 447 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 ADGRG4Q8IZF6 3080 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 SH3D21A4FU49 640 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 CASKO14936 926 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 TPST2O60704 377 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 DCTN3O75935 186 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 AHSA1O95433 338 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 NUDT2P50583 147 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 SLC16A1P53985 500 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 OR7A5Q15622 319 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 SWT1Q5T5J6 900 aaKnown RBP15.42■□□□□ 0.06
MDC1-206ENST00000489540 C8orf82Q6P1X6 216 aaPredicted RBP15.42■□□□□ 0.06
MDC1-206ENST00000489540 TFAP2EQ6VUC0 442 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 CCDC103Q8IW40 242 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 MICU2Q8IYU8 434 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 ANKS4BQ8N8V4 417 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 MFSD8Q8NHS3 518 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 PROX1Q92786 737 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 SLC38A4Q969I6 547 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 ZNF300Q96RE9 604 aaPredicted RBP15.42■□□□□ 0.06
MDC1-206ENST00000489540 CCT8L2Q96SF2 557 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 MCHR1Q99705 422 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 WFDC6Q9BQY6 131 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 HDHD5Q9BXW7 423 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 KLHL4Q9C0H6 718 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 USP22Q9UPT9 525 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 SLC9A8Q9Y2E8 581 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 CACNA1DQ01668 2161 aa15.42■□□□□ 0.06
MDC1-206ENST00000489540 CENPEQ02224 2701 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 A0A087WUJ7 227 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 A0A0B4J2E0 115 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 A0A1B0GX12 115 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 ZNF716A6NP11 495 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 M0R3H8 397 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 OR2T1O43869 369 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 CTAG2O75638 210 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 GOSR1O95249 250 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 PPP3CBP16298 524 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 KDELR2P33947 212 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 OR3A2P47893 321 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 SLC7A2P52569 658 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 CRYBA2P53672 197 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 LIPEQ05469 1076 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 ZNF613Q6PF04 617 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 OR6T1Q8NGN1 323 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 ZNF775Q96BV0 537 aaPredicted RBP15.41■□□□□ 0.06
MDC1-206ENST00000489540 LURAP1Q96LR2 239 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 FAM53CQ9NYF3 392 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 GPR52Q9Y2T5 361 aa15.41■□□□□ 0.06
MDC1-206ENST00000489540 NOSIPQ9Y314 301 aaKnown RBP15.41■□□□□ 0.06
MDC1-206ENST00000489540 FAM221AA4D161 298 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 A6NNC1 897 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 ZNF814B7Z6K7 855 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 CNOT4O95628 575 aaKnown RBP15.4■□□□□ 0.06
MDC1-206ENST00000489540 CDH12P55289 794 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 EGR4Q05215 589 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 SLC17A1Q14916 467 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 P2RY6Q15077 328 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 OTUD3Q5T2D3 398 aaPredicted RBP15.4■□□□□ 0.06
MDC1-206ENST00000489540 STAC2Q6ZMT1 411 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 ZNF100Q8IYN0 542 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 RNF217Q8TC41 542 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 WFIKKN1Q96NZ8 548 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 SF3B5Q9BWJ5 86 aaKnown RBP15.4■□□□□ 0.06
MDC1-206ENST00000489540 OR10A4Q9H209 315 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 PARPBPQ9NWS1 579 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 ADPRHL2Q9NX46 363 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 TESMINQ9Y4I5 508 aa15.4■□□□□ 0.06
MDC1-206ENST00000489540 AQP7P3A6NL99 342 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms