RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SFRP5Q5T4F7 317 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 DHRS4L2Q6PKH6 230 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 PAMR1Q6UXH9 720 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 Q6ZT83 130 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 ARMC8Q8IUR7 673 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 GABRG1Q8N1C3 465 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 UBE2J2Q8N2K1 259 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 APH1AQ96BI3 265 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 SMR3AQ99954 134 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 IKZF5Q9H5V7 419 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 CCDC134Q9H6E4 229 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 PLEKHF2Q9H8W4 249 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 NGBQ9NPG2 151 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 PARPBPQ9NWS1 579 aa11.98□□□□□ -0.49
LMO4-203ENST00000489303 ING1Q9UK53 422 aaPredicted RBP11.98□□□□□ -0.49
LMO4-203ENST00000489303 ELOA3DA6NLF2 546 aaPredicted RBP11.97□□□□□ -0.49
LMO4-203ENST00000489303 BBIP1A8MTZ0 92 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 DEFB108AA8MXU0 73 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 FRS3O43559 492 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 MRPL33O75394 65 aaKnown RBP11.97□□□□□ -0.49
LMO4-203ENST00000489303 GCM2O75603 506 aaPredicted RBP11.97□□□□□ -0.49
LMO4-203ENST00000489303 IMPDH2P12268 514 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 PRG2P13727 222 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 AQP1P29972 269 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 MDH1P40925 334 aaKnown RBP11.97□□□□□ -0.49
LMO4-203ENST00000489303 SLC16A1P53985 500 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 NR1H2P55055 460 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 RGS8P57771 180 aaPredicted RBP11.97□□□□□ -0.49
LMO4-203ENST00000489303 MTPNP58546 118 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 CEACAM7Q14002 265 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 OR7A5Q15622 319 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 ELOA3BQ3SY89 546 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 COQ5Q5HYK3 327 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 ALKBH2Q6NS38 261 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 PAQR6Q6TCH4 344 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 RETREG3Q86VR2 466 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 WFDC8Q8IUA0 241 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 CCDC103Q8IW40 242 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 C10orf111Q8N326 155 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 WFDC11Q8NEX6 87 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 ELOA3Q8NG57 546 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 OR52E4Q8NGH9 312 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 STK35Q8TDR2 534 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 HSD17B8Q92506 261 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 C3orf49Q96BT1 292 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 S100PBPQ96BU1 408 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 TRIM2Q9C040 744 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 DLL4Q9NR61 685 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 KLHL14Q9P2G3 628 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 SLC9A8Q9Y2E8 581 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 CHST2Q9Y4C5 530 aa11.97□□□□□ -0.49
LMO4-203ENST00000489303 ZC3H12DA2A288 527 aaKnown RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 LIPT2A6NK58 231 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 ZNF716A6NP11 495 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 ZNF814B7Z6K7 855 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 ATE1O95260 518 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 AHSA1O95433 338 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 NPPAP01160 153 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 PNMTP11086 282 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 GTF2E2P29084 291 aaKnown RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 ADSLP30566 484 aaPredicted RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 H3F3AP84243 136 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 HOXC5Q00444 222 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 BNIP2Q12982 314 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 KLF10Q13118 480 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 CAPRIN1Q14444 709 aaKnown RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 ADRM1Q16186 407 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 TRMT5Q32P41 509 aaKnown RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 OTUD3Q5T2D3 398 aaPredicted RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 INTS11Q5TA45 600 aaKnown RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 C1orf140Q5VVS0 124 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 FBXW9Q5XUX1 488 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 TMEM225Q6GV28 225 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 C5orf46Q6UWT4 87 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 Q71RC1 249 aaPredicted RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 BHLHA15Q7RTS1 189 aaPredicted RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 SSX8Q7RTT4 187 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 PATL1Q86TB9 770 aaKnown RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 ATG4DQ86TL0 474 aaPredicted RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 RANBP3LQ86VV4 465 aaPredicted RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 KRTAP1-3Q8IUG1 177 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 PCYOX1LQ8NBM8 494 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 RNF217Q8TC41 542 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 SLC26A7Q8TE54 656 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 DNAJA4Q8WW22 397 aaPredicted RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 SF3B5Q9BWJ5 86 aaKnown RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 C12orf10Q9HB07 376 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 TMEM27Q9HBJ8 222 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 SAR1AQ9NR31 198 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 GID8Q9NWU2 228 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 ADPRHL2Q9NX46 363 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 TESQ9UGI8 421 aaKnown RBP11.96□□□□□ -0.49
LMO4-203ENST00000489303 PRSS50Q9UI38 385 aa11.96□□□□□ -0.49
LMO4-203ENST00000489303 ABCA4P78363 2273 aa11.95□□□□□ -0.5
LMO4-203ENST00000489303 MRASO14807 208 aa11.95□□□□□ -0.5
LMO4-203ENST00000489303 SLC22A2O15244 555 aa11.95□□□□□ -0.5
LMO4-203ENST00000489303 AKR7A3O95154 331 aa11.95□□□□□ -0.5
LMO4-203ENST00000489303 VAMP5O95183 116 aa11.95□□□□□ -0.5
LMO4-203ENST00000489303 THBDP07204 575 aa11.95□□□□□ -0.5
LMO4-203ENST00000489303 ALG10BQ5I7T1 473 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms