RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 NCMAPQ5T1S8 102 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 OTUD3Q5T2D3 398 aaPredicted RBP12.37□□□□□ -0.43
VTI1A-206ENST00000489142 LRIF1Q5T3J3 769 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 GCNT6Q5T4J0 391 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 FBXW9Q5XUX1 488 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 WBP2NLQ6ICG8 309 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 ADAM5Q6NVV9 412 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 Q71RC1 249 aaPredicted RBP12.37□□□□□ -0.43
VTI1A-206ENST00000489142 ZNF433Q8N7K0 673 aaPredicted RBP12.37□□□□□ -0.43
VTI1A-206ENST00000489142 TMEM99Q8N816 258 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 KBTBD8Q8NFY9 601 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 OR52E4Q8NGH9 312 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 OR52N5Q8NH56 324 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 MAGEB18Q96M61 343 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 SPATA9Q9BWV2 254 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 RAD21L1Q9H4I0 556 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 NPHS2Q9NP85 383 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 ADPRHL2Q9NX46 363 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 THUMPD1Q9NXG2 353 aaKnown RBP12.37□□□□□ -0.43
VTI1A-206ENST00000489142 ZNF232Q9UNY5 417 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 RNF115Q9Y4L5 304 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 FLVCR1Q9Y5Y0 555 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 CADP27708 2225 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 USF3Q68DE3 2245 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 TRBV5-3A0A0A0MS03 114 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 DPRXA6NFQ7 191 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 LIPT2A6NK58 231 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 CCT8L1PA6NM43 557 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 DNPH1O43598 174 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 MRPL33O75394 65 aaKnown RBP12.36□□□□□ -0.43
VTI1A-206ENST00000489142 PGM3O95394 542 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 ARAFP10398 606 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 BMP2P12643 396 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 GGT1P19440 569 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 FKBP2P26885 142 aaKnown RBP12.36□□□□□ -0.43
VTI1A-206ENST00000489142 AQP1P29972 269 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 ATP4BP51164 291 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 SF3A3Q12874 501 aaKnown RBP eCLIP12.36□□□□□ -0.43
VTI1A-206ENST00000489142 FAPQ12884 760 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 YTHDF3Q7Z739 585 aaKnown RBP12.36□□□□□ -0.43
VTI1A-206ENST00000489142 GPAT4Q86UL3 456 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 CIARTQ8N365 385 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-206ENST00000489142 BBS10Q8TAM1 723 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 C3orf49Q96BT1 292 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 Q96MF0 132 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 PIP5K1AQ99755 562 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 NAA11Q9BSU3 229 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-206ENST00000489142 PRR14Q9BWN1 585 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 ESRP2Q9H6T0 727 aaKnown RBP12.36□□□□□ -0.43
VTI1A-206ENST00000489142 VIPAS39Q9H9C1 493 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 BCL2L10Q9HD36 194 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 NPAP1Q9NZP6 1156 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 LAMP3Q9UQV4 416 aa12.36□□□□□ -0.43
VTI1A-206ENST00000489142 CIB4A0PJX0 185 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 TRIM64A6NGJ6 449 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 TRIM64BA6NI03 449 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 GPR171O14626 319 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 ARHGEF9O43307 516 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 TPST1O60507 370 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 EIF1BO60739 113 aaKnown RBP12.35□□□□□ -0.43
VTI1A-206ENST00000489142 GPIP06744 558 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 ITGA5P08648 1049 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 PTNP21246 168 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 PTH2RP49190 550 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 CDK6Q00534 326 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 LGALS3BPQ08380 585 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 SLC17A1Q14916 467 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 C1orf140Q5VVS0 124 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 SHEQ5VZ18 495 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 PAQR6Q6TCH4 344 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 LRRC75A-AS1Q8N1F1 130 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 OR9K2Q8NGE7 335 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 TMEM171Q8WVE6 324 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 ZNF385AQ96PM9 386 aaKnown RBP12.35□□□□□ -0.43
VTI1A-206ENST00000489142 CPPED1Q9BRF8 314 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-206ENST00000489142 ASB6Q9NWX5 421 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 SLC9A8Q9Y2E8 581 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 IFT52Q9Y366 437 aa12.35□□□□□ -0.43
VTI1A-206ENST00000489142 A0A0G2JND7 137 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 A0A1W2PP18 115 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 A8MVM7 634 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 TMEM229AB2RXF0 380 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 H7C1Q1 480 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 SMAD7O15105 426 aaKnown RBP12.34□□□□□ -0.43
VTI1A-206ENST00000489142 EDF1O60869 148 aaKnown RBP12.34□□□□□ -0.43
VTI1A-206ENST00000489142 SOD3P08294 240 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 HTR2AP28223 471 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 ZNF83P51522 516 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 SPOCK1Q08629 439 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 SCARB2Q14108 478 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 SELPLGQ14242 412 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 TIMM23BQ5SRD1 257 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 TSPO2Q5TGU0 170 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 PRAMEF8Q5VWM4 474 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 PRAMEF7Q5VXH5 474 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 DLEU7Q6UYE1 221 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 RETREG3Q86VR2 466 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 ZNF611Q8N823 705 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 IGFBPL1Q8WX77 278 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms